Protein Info for mRNA_5226 in Rhodosporidium toruloides IFO0880

Name: 13594
Annotation: K12472 EPS15 epidermal growth factor receptor substrate 15

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1438 PF12763: EF-hand_4" amino acids 165 to 255 (91 residues), 36.1 bits, see alignment 5.2e-13 amino acids 308 to 387 (80 residues), 38.6 bits, see alignment 8.7e-14 PF00627: UBA" amino acids 1400 to 1436 (37 residues), 34.8 bits, see alignment (E = 1.3e-12)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1438 amino acids)

>mRNA_5226 K12472 EPS15 epidermal growth factor receptor substrate 15 (Rhodosporidium toruloides IFO0880)
MASEPLPAQLSAYKPSKHERDAYNYLFDKADTQQLGVLTGDLAVPFFSHSSLPPLILGEV
WQIADPDNSGFLSPERFGVACRLIGHAQERNRRGAPEVKTEDVGKAGPLPTFQGYALPAH
LSHPPPSSTSSSSALSPPTSPSPAPAPARQSSLPPSNPNLTTISPTDKANYTRIFSAANG
GSVGGLLDGDKAREIWVKSGLPYDVLGQIWTLADTHSRGALDLTDFTIGMHLLHLVLDGS
LPRSVSGLPKVLDPKMYAAAAGLPLPGQGAPTPSTPSAAPTPTPAPAPAQGGQGWAITPA
EKSESDTWFSQLDTQNRGILEGDQAVGFFGQSGLDVGKLARIWDLADFENKGFLTKDTFA
VAMHLVKKAVADPSFVLPDSLPDHLRPPTSLSATAGGAGGSHVQRDLLDLMDDEDGAPST
PTAAPSFASQPQPQRSLSPQLTGQRTTIPPPIQATMQPLPLSPQGTGQPQRSLSPQATGG
SARGVGMVSSPLATSAPRGGFGDNFAPASSPAPQQQQQQQTSSNFFDENDDADLAATASS
LASRASSLRTEHAAVSKDLESTSTSRAELESQVQAHNKEIESLQSQVSSAREAFETERTR
VEELRARRDEQKRVLDRARHELISAQSDLSGLRMEKTEIEGEVLRDKEEVREVKRQVAMV
EEEKRILSAEIERVRKEVRREKGLGAIARKQLASVEADRSRLEGELERARAGHVEGEGEE
EKGIVTAKDEAALAATAPTAPAAHAAAVPLPATPAAVVSPAASTKSTNPFDRFTQPQQGL
SPRPTGGSAKSTNPFASFGTRAQPQERAAETPQPKEEEQTSLPAAAAAAIGTGALAALGA
AGAGIAHAVGVGKSDDEEKKEVEHGDEAEKNPFGIPSTAETKDARDDGFGDDFAASSAQP
SAGGFEDDAFNVTPTATTAPTGADDGFENEFKAFDASAPADSSVPEPVEGTLGEIDSSAG
FTDAVRDLNEGKGPDAVEGTLGEVDKDAGFDEAFKEVEEHHHAPSAEHEATEALPKLDKG
KERAIEDDVFGEGGVGTSTPPRVDYDSDSGEDEAEGPEEAFGSTRPQQRDIESSADESGF
ATPAAASTDLGASSVADIAAVTGAASLPDDAEAGPTSELASRGAGEQARTNDSSESGESY
VHVDVGPTGTAESVDMLEPPAPASFQPASPAVTPTQRRAAPPPPQRSAAAVSTPPVVPAF
PGDADKGIAPVGIDVDQPVSKPEDDFESAFADMSVSSPPGASSINAPTATIQPDFDSFDN
DFDFQPSFDEAEAVSAAQTAHNLAAVQSEVAPTDFDDAAFADFDSTFANNPSQAPSQAQA
SKSADGFDSAFDDSFGVSSPSTGSAAAPAITTGEGAEGGIPALGAPLGPAATASPVPQYA
PPPGPPPPPKHHSTATAGDEDSDAVKTIKSMGFSREQAIEALEKYDYDVNRAVNSLVG