Protein Info for mRNA_5241 in Rhodosporidium toruloides IFO0880

Name: 13609
Annotation: K01099 INPP5B_F inositol polyphosphate 5-phosphatase INPP5B/F

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 867 PF03372: Exo_endo_phos" amino acids 77 to 379 (303 residues), 29.9 bits, see alignment E=4.1e-11 PF00620: RhoGAP" amino acids 739 to 836 (98 residues), 34.1 bits, see alignment E=2.4e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (867 amino acids)

>mRNA_5241 K01099 INPP5B_F inositol polyphosphate 5-phosphatase INPP5B/F (Rhodosporidium toruloides IFO0880)
MHDVRWDRVGAAYSARANAADDSAFANGSPSRSFDPTDTDSEYTEGERAAIERWIADRLR
EREEEFVRKEEIRVWCGTFNVNDKQPKNGGADIEAWVDSSNGAELLVFGFQELDLSTEAM
LRYTPYRGEVWRKAIEEALARQEGVSYSRVHSRQLVGALIMVYVRSDVKHHVGDVTSASL
ATGLMGLMANKGAVGVRLRWKDTPLTFVNSHLAAFVPNVAQRNAQFRDTAAQLLFPFASY
EERDAWTPNLKPDAPRPVGEGWSVWESDVLVWMGDLNYRLELPREEVERMIAAQQYDLLL
QFDQLEAQKKHGLAFADFEEPAITFAPTFKFDVGTDSYDTSEKQRVPSWTDRILYLSTRA
AAVQVERYTSHPDVVMSDHKPVSAMLRLSVSSILTSVSSVQICSRLSPQVYEVSVHDRDK
VRHDIVSKLHSFAGNALPEVKLEPGPSVGFERVELDTPTSCEIELVNVGSVFATWAFALK
DGSSSLTPPWLSVTPTSGLILPSSRQRITFTVKVTPDIAGTLSFPTSGTPENDLSELLVI
SLRGRDLFLAISVKEWVPTVFGASLDCLARLHEPIRKASTEQRRRIGAAAAGPVEDEEGI
EKSAVPEVLHRLVSFLGEHALDVPGLFATPGELELVRVVRDCLDTGEDFPLDELLPSSVL
SAGSETSTIRSDGPEDKQHLLDAVSALDQLESDIGAISLSSPTLPSNFASAPLETASSPS
RTSLPADTSSTPADESDSAERYIGLHSVADCLLRFLEYLQEPVVGGEAFERAIRCENRDE
AYAVVQSLKETHANTLLYIVAFLRIAIKQAPTSTEQAARPDRFAIVFSSVLLRPLSKSAA
SSAQGKPLEPASIPRRKKQFLAWLLEE