Protein Info for mRNA_5273 in Rhodosporidium toruloides IFO0880

Name: 13641
Annotation: K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 374 transmembrane" amino acids 188 to 214 (27 residues), see Phobius details PF08240: ADH_N" amino acids 33 to 154 (122 residues), 107.5 bits, see alignment E=3.4e-35 PF00107: ADH_zinc_N" amino acids 195 to 322 (128 residues), 67.7 bits, see alignment E=1e-22

Best Hits

KEGG orthology group: None (inferred from 41% identity to clj:CLJU_c23220)

Predicted SEED Role

"2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)" in subsystem Acetoin, butanediol metabolism (EC 1.1.1.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.1.1.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (374 amino acids)

>mRNA_5273 K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase (Rhodosporidium toruloides IFO0880)
MPHAEQQTMKAAMYYGPHDLRIEEVAKPVPREGEVLVKVAWCGICGTDLHEYDAGPILVP
NKQPHPITRCSLSQGPVCLGHEFSGTVEEVGPGVEGDWKKGDRVVIEAVISCHDCYACRS
GCNNACTSLGFVGLSGPSGGLAEYFSSPASFLHRLPPNVSLKAGAMCEPLAVAIHAVKRA
GFEKGMKVLVCGAGPIGVFLTVVLKAMGASLIIVSEPSTTRRKFATLAGATQTVSPLEDP
SDLLSTLRALTGENEGFDIAFEAAGVESALALAISAIRTRGVVLNVSVWSKEPKIDMNQL
VFGEKSIRGASCYFEDHPEVMRALGAEEIKLDQFVTSTIPLDQLVEGGFEQLLHNAENHV
KILVSPSGNLDQPF