Protein Info for mRNA_5274 in Rhodosporidium toruloides IFO0880

Name: 13642
Annotation: KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 361 PF00069: Pkinase" amino acids 9 to 265 (257 residues), 225.8 bits, see alignment E=9.6e-71 PF07714: Pkinase_Tyr" amino acids 10 to 258 (249 residues), 88.3 bits, see alignment E=8.3e-29 PF17667: Pkinase_fungal" amino acids 114 to 188 (75 residues), 27.8 bits, see alignment E=1.7e-10

Best Hits

KEGG orthology group: K00908, Ca2+/calmodulin-dependent protein kinase [EC: 2.7.11.17] (inferred from 66% identity to cne:CNI04110)

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.11.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (361 amino acids)

>mRNA_5274 KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily (Rhodosporidium toruloides IFO0880)
MAATVPCQYKTGRTLGQGTYAVVKECVHIKTGKYYACKVINKRLMAGREHMIRNEISVLK
SISQGHKNIVTLWDYFETQNNLYLVTDLCQGGELFDRICAKSYFLEEDAAKLVRTVMGAV
EYLHSHGIVHRDIKPENLLYRSKDEDSDLLLADFGLSKVMDDQQFSALTTTCGTPGYMAP
EIFKKLGHGKAMGVVTYFLLCGYTPFDRDNQVDEIQAICNADYAFEPEEYWTGVSDTARD
FINRCLVIDQTKRMTATEALAHPWLAQLAPTASATAQAQRPDLLPSLRKNFNAKGTWKRA
IMGVRAAGALKAGGEARRATLLAEATGTEEERQKVFEQAQRAKKEAEEEANQVESANVFA
Y