Protein Info for mRNA_5418 in Rhodosporidium toruloides IFO0880

Name: 13786
Annotation: K01502 E3.5.5.7 aliphatic nitrilase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 379 PF00795: CN_hydrolase" amino acids 9 to 284 (276 residues), 147.1 bits, see alignment E=3.2e-47

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (379 amino acids)

>mRNA_5418 K01502 E3.5.5.7 aliphatic nitrilase (Rhodosporidium toruloides IFO0880)
MTTAARQFRVAAAQIEAVFYDAQANLARILAAIEEAAAGGARLVVFSELALSGYPFHIWA
LPYGEQSPLITEFYTKAAVEADGPEMESIRACCIKNSIRAVVGFSERDGGSLYMSQWLVG
PEGDVVVRRKFRPTSLERIVFGDGDGSDIKVHKTELGNVGVLQCWEHAQSLLKYAMSSQH
EEVHCASWPVFPSELPHHSLSRSSNAALLTAYAVETGTFVVSASSFLSPQNLDKVFGEKE
KILSLGGGYTTILDPEGRTLALAEPDKNEIIYADVDLDACYKARSVLDPTGHYSRTDVFQ
VHFDMTPRHIINVAGPVSRSPVPASNAPLFRQLRRTMFDHSNVSSASTKKAAAVPEVNGG
KETKQEGDGAEVASVEGSP