Protein Info for mRNA_5472 in Rhodosporidium toruloides IFO0880

Name: 13840
Annotation: K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 855 transmembrane" amino acids 219 to 233 (15 residues), see Phobius details amino acids 253 to 273 (21 residues), see Phobius details amino acids 286 to 315 (30 residues), see Phobius details amino acids 335 to 368 (34 residues), see Phobius details amino acids 389 to 410 (22 residues), see Phobius details amino acids 712 to 731 (20 residues), see Phobius details amino acids 751 to 771 (21 residues), see Phobius details amino acids 780 to 800 (21 residues), see Phobius details amino acids 812 to 828 (17 residues), see Phobius details PF02366: PMT" amino acids 173 to 416 (244 residues), 271.4 bits, see alignment E=1.2e-84 PF02815: MIR" amino acids 462 to 626 (165 residues), 98.3 bits, see alignment E=8.1e-32 PF16192: PMT_4TMC" amino acids 651 to 851 (201 residues), 186.6 bits, see alignment E=6.1e-59

Best Hits

KEGG orthology group: K00728, dolichyl-phosphate-mannose-protein mannosyltransferase [EC: 2.4.1.109] (inferred from 67% identity to cci:CC1G_08308)

Predicted SEED Role

No annotation

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.109

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (855 amino acids)

>mRNA_5472 K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase (Rhodosporidium toruloides IFO0880)
MSFRRPRSPSRPLPSTRSQSPSPPPTPDAEDPYAPRQPGLPLYTARKNSHTKDRQDMVEV
VDSSTARRRVPGQSPAVLFDASSAAGGDGQDTVDEYDADVEGAQGFARARRDSKSDKGEK
DVWPVSGIGMEGRIPETRQEFLQKGGKARARREPRAIGREVVSDLRAQIPLIIYTILSLC
TRLYRIGANNTVVWDEAHFGKFGAYYLNRTFYFDVHPPLGKMLVGLAGALSGFNGSFDYP
SGAVYPDHVPFHAMRIMLALPGVAMVPLAWGTAVELRMTKWGRHIVTLMVLTDLAWLAIS
RFVLLDSLLLFFTFTTVYCLACFNNQQRRPFEEDWWIWLTLTGISIGCVCSVKWVGMFVT
ALVGLYTVEDLWNKFGDLRMSYRTYARHWIARALCLIVIPFFVYALTFKIHFLILNHSGP
GDSQMSSLFQAHLHGNDFAQNPLEPAFGSRITLKNMGYGGGLLHSHVQTYPVGSQQQQVT
CYHYKDENNDWVLTPTWEADQIDLENGEIVFLRHGDQLRLVHASTGRNLHSHAIAAPVTK
LANEVSCYGNATVGDSNDYWVVEVVDDFLRGARHKFDRIHSLSTRLRFKHLNSGCYLRAA
NAVLPQWGFKQVEVSCEKENNPKDEHTYWNIESHWNERLPTGNQKLYRSPFFRDFWHLNV
AMMTSNNALVPDADKEDTIASKPFEWPFLWNGMRMNGWQDFGIKYYLIGNPVTWWLSSAS
LIVWAFTLLWHLMRFQRKINDFAPGEWNHFLYLSKIAFGGWFFHYFPFLIMGRVTYLHHY
LPTLWFSVLMAGVLLDHFFFRSRRLTGRTKTLVFAIVAGAVVGTWWWFRACAWGIHGPAS
NLWGRKWRKTWNIYD