Protein Info for mRNA_5614 in Rhodosporidium toruloides IFO0880

Name: 13982
Annotation: BLAST Zinc finger protein DZIP1L [Rhizoctonia solani]

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1198 signal peptide" amino acids 1 to 15 (15 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1198 amino acids)

>mRNA_5614 BLAST Zinc finger protein DZIP1L [Rhizoctonia solani] (Rhodosporidium toruloides IFO0880)
MLLILTGLLKLCIGGPLRFKPHPSCFEDAIENFTESVLNCVPPAPPSPFVGLDFSSPKPR
PRRSSTRPPSPKSRCRRVSVQQKDPLESEDDTYDPFTFPYTYDPSRPLPPISRPPGFPLL
TREMLLPADWFPAVDPDAPRQEMPVWNGEGLDDILAKPSTTSSPTPTPTPAPAPVEPVEE
VQQVDPPELETAELDDSDSDDSDYSDAASSLLEDSDCPDGSETSDEGDASDECGEFDDTD
DEDSEDESEQDDSYNESSCDEDASVTDAEEATTAETQVADAAQAFEADVAADEQASASTA
QTVPDQDTALSDTETDAFDALPEPFSIPLRRTAAVRWPQTSDSRARRSPNSPPRRKKLRH
FARGIGSLRDKRGIEAVPRGESDIDDYIHKHDIMYPFYEPSRIRNADSEVDDEPRRPAPR
RKNRYQTLERSRPAFKRSRTRTYRATSTDTDSSDDEDEVCDSSAPQRVSRVDFLSVVTRL
KTRLSFLAAARKRFNRLISVTLYGTAAPEATAANENDAVGLDSSLDGETAEEAIAHETTQ
FTFTPPDELPNNLSIPVTNEDPLDAPTAPESTLDDGAKDECDPIRLADDSTAVEEDDDDS
GCVSPGIDAPAAFQLPAVEEAAAFETEEGDAIAAKEADASTTPTPVTTWSTSWALVLVRR
RPAKRRSSAPPAPADTPLRRRRSRGSKRPRTTFPDVAGVREKRKFEEDSTSFYCSPFSKK
EHAESSSQTLEGGRPAQKRPRQVASGLADDTTDNLSHTYIRTSPRPLAKTPYASPRPRRR
AERRFPSRTPPSVVTDLDAKPASPSPPSSHTARQIGDSWRDSAGFLFKIDQYGQQRRLVE
VVEMRQVHKMRTGTDESIEKAAYRVLVERWVTDEEHDALRIDGKLAWQVFERDQQASTCA
KANYQDESCTPAANSLSLPLPNEDSTRSAASPILTAPYAICPDTLPTPSFEPSTGADLSD
LSFDFVPTVASFAGHGTAVATSSSPEGSASKIAVGEQAWMRSQEKTAARRVRRDPFARSC
RLTPSASPHAPKPRRGRRPPHLPPISRLAVATWLSTVDALLYVNECVNSRTPTTFRASTS
VQPAGCLFPQPPWSARWRLSRKGDSKPTFATRRGFRPSLSFLLSRNHFALRLALAIGETT
KALSVVEEPETNQGATVQHATFAAVATTRRNAKTGMGPGSQASPWFRINWFVSLFFDD