Protein Info for mRNA_5714 in Rhodosporidium toruloides IFO0880

Name: 14082
Annotation: K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 448 PF00814: Peptidase_M22" amino acids 60 to 250 (191 residues), 190.5 bits, see alignment E=2.6e-60 amino acids 333 to 413 (81 residues), 72.1 bits, see alignment E=3.4e-24

Best Hits

Predicted SEED Role

"TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (448 amino acids)

>mRNA_5714 K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase (Rhodosporidium toruloides IFO0880)
MPTRRKQAPNPLPAPPRPLLALGLEGSANKLGVGLILHSPPSSSAQGTTSAIGDPATVSI
LSNIRHTYVTPPGEGFLPSDTARHHKRWISEVVEKALQEGGKTMEDVDVVCFTKGPGMGA
PLQTVALVARTLALMYNKPLIGVNHCVGHIETGRLITASPSPIVLYVSGGNTQVIAYSQQ
RYRIFGETLDIAVGNCLDRFARIIGLSNDPSPGANIEKEAKKGRRLLPIPYATKGMDIML
GGILHAAEAYTRDPRFRPTSSSSSLKPAPSGQATPVNGKTGALMVSQEERRRRAEGEGPQ
AALQNIGLAADRVAGSNAAAGTVEAVPPVAEEEEDIITPADLCFSLQETVFAMLVEITER
AMAHAGGKEVLIVGGVGCNARLQEMMEIMVSERGGSIFATDERFCIDNGIMIAHAGLLSY
RMGYETPLEETSCTQRFRTDEVLINWRP