Protein Info for mRNA_5818 in Rhodosporidium toruloides IFO0880

Name: 14186
Annotation: K14857 SPB1, FTSJ3 AdoMet-dependent rRNA methyltransferase SPB1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01728: FtsJ
  • amino acids 25 to 202 (178 residues), 185.1 bits, E=2.1e-58
• PF11861: DUF3381
  • amino acids 286 to 436 (151 residues), 147.5 bits, E=5.1e-47
• PF07780: Spb1_C
  • amino acids 716 to 942 (227 residues), 250.7 bits, E=1.7e-78

Predicted SEED Role

"Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)" in subsystem Bacterial Cell Division (EC 2.1.1.-)

KEGG Metabolic Maps

• Alkaloid biosynthesis I
• Anthocyanin biosynthesis
• Benzoxazinone biosynthesis
• Biosynthesis of alkaloids derived from shikimate pathway
• Carotenoid biosynthesis - General
• Flavonoid biosynthesis
• Histidine metabolism
• Insect hormone biosynthesis
• Naphthalene and anthracene degradation
• Phenylpropanoid biosynthesis
• Porphyrin and chlorophyll metabolism
• Tryptophan metabolism
• Tyrosine metabolism
• Ubiquinone and menaquinone biosynthesis

Isozymes

Compare fitness of predicted isozymes for: 2.1.1.-

Use Curated BLAST to search for 2.1.1.-

Protein Sequence (955 amino acids)

>mRNA_5818 K14857 SPB1, FTSJ3 AdoMet-dependent rRNA methyltransferase SPB1 (Rhodosporidium toruloides IFO0880)
MGKDQKKTGKGRLDKWYQLAKEQGYRARSAFKLVQLNRKYDFLASARCVIDLCAAPGGWL
QVAAKQMPTQNSIIIGVDLVPIKPIPRCVTLVEDITTESCRRALRAEMKDWKADVVLHDG
APNVGSAWVQDAFTQVELVLASLKLAVEFLRPGGTFCTKVFRSKDYNSLLWVFNQLFTKV
EATKPPSSRNVSAEIFVVCQGYLAPAKIDPKLLNPKFVFAEADGVGLDDDERKITEIDAA
GDDVDAESGKGKKKVKTSVNPLAKLDGKAVTTKDVMTPASLNVFAPEKKRKQREGYDDED
RILYRECRVMEWVRHQDPIGVLSMVNKMTWAEDEDKKLLKNPLTTAEIKACVEDLKVLGK
KDFKMLLKYRAAIREDLGLDVKVDEKEEVTETVEVQPLDEEEQITQELERLAREEALKKR
RDRRRVNEKKQREVQRMQLNMVTPMDIGLERQDGVDDADMFDLGEVEGGKERRGVNGELG
SDADEVLSEEDEEEVARKRQRRLPLNPIPEAALAAQNAEDDDEDVSDTERRTRRLEESLD
ILYDSYQQSKLERDAKHKVKEQRRKKALAEGGEFKGLDDEAQDSDEESEESDGIDSDPAP
QPSDDEDSSDEEEEEPVAPTASTSKAGLITSLKQNKVLSTSAKSRQAAMWFDQPAFKGLP
GGGLEALLGGSGSDDEDDEMDGDEEDASEDDEGVRTVWDEMGEGSDEEEEEDESDEESDD
DFRGAREEFVEDEDMEDEADIDAQEQAEVVKAQRIAKLGLTTAEAMTLAQQLVNQERTKT
QLVDEGFNRHTDIVGGDGLPTWFIDDEQRHFRHNIPVTKEAVQAIRDQQRALNARPIKKV
AEAKARKKMRQIRRLEKMRAKAQGINDDEENGLTEKEKAASIAKILAKSSKAGKQKKPET
KVVVARGANRGIKGRPKGVKGKYKIVDPRQKKEVRALKRIAKRDRKNGGRRKANK