Protein Info for mRNA_5839 in Rhodosporidium toruloides IFO0880

Name: 14207
Annotation: KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 477 transmembrane" amino acids 219 to 245 (27 residues), see Phobius details amino acids 266 to 284 (19 residues), see Phobius details amino acids 300 to 320 (21 residues), see Phobius details amino acids 341 to 359 (19 residues), see Phobius details amino acids 364 to 381 (18 residues), see Phobius details PF01545: Cation_efflux" amino acids 210 to 374 (165 residues), 63.5 bits, see alignment E=2.5e-21 PF16916: ZT_dimer" amino acids 390 to 465 (76 residues), 27.4 bits, see alignment E=3e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (477 amino acids)

>mRNA_5839 KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) (Rhodosporidium toruloides IFO0880)
MVFASPVNGLSRPRHPPQPLLRARVGLMKAQKPTFVLHEDAESSPASRSTSRERARRYSH
DEGTRTPPSHHLCDLDEESALESTGGESENDALLANGRSARGTPKRRRTLPQNGYGTLGS
PHGNYLTLNEGAPFKRTESILRLTGLIDDRAGEYEKFRKSDEELKKMPKKDAFIEVDEIL
DNARAKAATGELLPIGLHSSEKQDDHRAAIALVFLSHSMSLIASTVDSAMDLLSTVIVFG
TSRYLEHRDWKSSYIYPTGKRKMEPLGVLIFSVFMISSFLQVFIESVNRLFDENLEFTRL
PLVALLVMVSTIVIKAGVWLSCRAIKSASVEALQQDAENDIVFNFFSTLFPFAGQLIGFR
YLDAMGGALLSLYIGTLLDNVRKLTGRRAPPQEHQRIAYLLTRFSPLVTAIQHLSLYYSG
EGMVCEVDIVLPASTSLTASHNLGEACQYAIEQLSGIERAFVHVDCTVNPHSGHLER