Protein Info for mRNA_5877 in Rhodosporidium toruloides IFO0880

Name: 14245
Annotation: K00624 E2.3.1.7 carnitine O-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 625 PF00755: Carn_acyltransf" amino acids 28 to 607 (580 residues), 638.7 bits, see alignment E=5.3e-196

Best Hits

KEGG orthology group: K00624, carnitine O-acetyltransferase [EC: 2.3.1.7] (inferred from 57% identity to scm:SCHCODRAFT_15006)

Predicted SEED Role

No annotation

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.1.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (625 amino acids)

>mRNA_5877 K00624 E2.3.1.7 carnitine O-acetyltransferase (Rhodosporidium toruloides IFO0880)
MSSTRSVKQQQPQEDTSVGPMYRFERTLPSLPVPTLEETAERYLASIRPYHTAQEPSASS
EPLESWAKSEQAVKDFVQSPLVNELQQRLQKRAQEKDSWLSEWWNETAYFGWRGPVVPGV
NYYYAHKDDRSRRTGPARAAGLLRALLYFRRLCNTQQLEPEMARKTPLCMSSYKYLFNAT
RLPTSPSDTAKIYDPETHNHIVVVRKNKFYEVPVVDEKGEWLSEKELEVLFKQVVDAAGS
EADPHPVGALTAADRDTWTQARTNLIQHDAQNEKLLERIESAIIVVSLDSNSPYTREEHS
WGLWVGDGKDRWFDKHQLIVFENGKSGFNGEHSCMDGTPTSRLNDWLLRSLDHGKIDLGS
STPRSASALPKITPLAFNLPESVKSAISSSISAHESTMSKHDLAVLEYAGYGKDQIKQYK
TSPDSYAQLVMGLAYYKMEGKVAPTYESAQTRKYKLGRTEVIRSTSPEALEWYKAMEDPK
RSSTECVELFRKAAAKHIKLAGEAADGRGVDRHLFGLKKVLKEGENLPALYQDPTFAQSG
NWILSTSQLSSEYFAGWGYGEVVDEGYGLAYAVNNRTLRFTITSMNRGKHNNVHAFRHYL
EQACNEVREMMEKGGAVPSADKAKL