Protein Info for mRNA_6079 in Rhodosporidium toruloides IFO0880

Name: 14447
Annotation: K12776 MEK1 meiosis-specific serine/threonine-protein kinase MEK1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 499 PF00498: FHA" amino acids 80 to 148 (69 residues), 52.1 bits, see alignment E=1e-17 PF07714: Pkinase_Tyr" amino acids 182 to 389 (208 residues), 82.9 bits, see alignment E=3.5e-27 PF00069: Pkinase" amino acids 184 to 478 (295 residues), 176.2 bits, see alignment E=1.3e-55

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (499 amino acids)

>mRNA_6079 K12776 MEK1 meiosis-specific serine/threonine-protein kinase MEK1 (Rhodosporidium toruloides IFO0880)
MPSIVDTVLPNPRKRVLAADDAVSRPLKRTKHSLARNAQRAQAGTVGLAGTVNGECARLV
TRSPETGAQALIVTRLRPFHIGRSPNNDYIVPHPAVSARHCALYALEADTGEVVVCLEDE
STNGTLHNDRKIRHTTVVLNDGDKVEIGGQVFRYHHPAREAAARQDTASDSSPQRVGDYL
VLPRTLGSGAFSQVHLAISTVTLKQVACKKLPRRRVSGDRLLVIQREIDMLKSASHPGIN
KIEAVEVDNEFVHIFLELVPGGDLFTYLITRTRLDAPEAKWILYQLLKALEYLHDELGVA
HRDVKLENVILATRGPFPRVQLGDFGQARHADQRFKSLQGTLQYMAPEQLLAWTRQEGYD
GKKADIWAAGILFALLLTGGHPFEPFMTSSSAASARYSPHGKAKADSDALFGRSAVAELA
RTPADKPVCKNVVKGEMVLPDMHFGSGDADVRDLLNSMLHPLASSRCTAHEALQSPWFKS
SEAQLEELYRRVVVERTEG