Protein Info for mRNA_6090 in Rhodosporidium toruloides IFO0880

Name: 14458
Annotation: KOG0143 Iron/ascorbate family oxidoreductases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 394 PF14226: DIOX_N" amino acids 28 to 119 (92 residues), 47.8 bits, see alignment E=2.4e-16 PF03171: 2OG-FeII_Oxy" amino acids 230 to 318 (89 residues), 45.4 bits, see alignment E=1e-15

Best Hits

KEGG orthology group: None (inferred from 54% identity to dha:DEHA2E24134g)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (394 amino acids)

>mRNA_6090 KOG0143 Iron/ascorbate family oxidoreductases (Rhodosporidium toruloides IFO0880)
MTIAKPYYPPFVHVEPTKENIPFVELGVVDLSKYVEGPEGLEVRKQLAAELEEAVTTQGF
FFLEGHGYPKSKLDYLQAVSQAILDLPLEEKERYSAGSAQSDADAIDDGKKLGAERGSGF
KQRGYWAMQNGVRDAIEHIKYRDLLHPTLRNKHSYPPLVQQHLPEIAEYFSFLHLNVVRK
LASLFDIILELPEGTVWNLFEVHEDQPELSGGGFGRAMLYHGMSASDEAKTNNTWLRGHS
DASALTFITSQPMASLQFRDYHDGEWKYVGYRPNALVLNIGDRFEFLTGGWAKSTIHRVV
SPPKDQRGHRRLGVIYFCDIKPSVYIDPDTLQSPKLARLGYKKPEEWERITGEQWDDQKA
KSFGKAYINLPPGDEPAPFYIYGRLAERWHQLGK