Protein Info for mRNA_6306 in Rhodosporidium toruloides IFO0880

Name: 14674
Annotation: K05727 DOCK3 dedicator of cytokinesis protein 3

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1800 1900 1959 PF16172: DOCK_N" amino acids 80 to 442 (363 residues), 245.8 bits, see alignment E=1.1e-76 PF14429: DOCK-C2" amino acids 465 to 664 (200 residues), 132.7 bits, see alignment E=2.3e-42 PF06920: DHR-2" amino acids 1283 to 1790 (508 residues), 241.2 bits, see alignment E=3.5e-75

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1959 amino acids)

>mRNA_6306 K05727 DOCK3 dedicator of cytokinesis protein 3 (Rhodosporidium toruloides IFO0880)
MTSRAKSLRQTDDDGRALVERRQHQAPNGATLPASPRKRSRNCASITSLGSVGGSFQSAR
LSRLGLASPGADERSPPPLPSLKCGDETSSGVDEPLIDEIACALREWQNLMHAHLVRGAY
TLFETVAEHSDALHGMRQQLFSKSLGSADAARLRREAVAHLVAGNAAQGLDIIVRHPGSG
ALVETKVEGDVDEKAWMTVPELYKTQVALGYSPSAPSQSHAHPSSVRLDFQGLVGNLATP
GEILELYFSLFSKAESRYVTEEACILIDHEGTLVGNQTRQTVFRDLTKNDMQSELYLVCR
IIRNGFYRSSGSISTAGAPPRSVSRNGLSLASSRHSARSDAASLDSAPSPATLDVSPAPE
AMLHRDSAGHKSCRRPFGAAVADLAAMTARQSPITVPIFVPVDEATFSTLHEDLIHSRTR
RFEQTPHAQHITVEIEYLSPDDDKRDLVECSVTPRLDFPDVSSKEQRNDFYVKLWSGEFY
RSGSGTATVRSLAQLAAAGGSAGSFEISAEVRSRYGQPLDGSLSRGAGQQPVSAFVSTVY
KGAENPSWGELFKVSLPPEEFVDSHLFLTVRDRNSRSDLPFAFAYLSFLRDGTAVQADGT
HSLVLYKYDEAIASPAFYFQVPAKRDSDSEPPSIPPSVSKTLVPLRDSIKLRTFLVSTAL
SQDDVLLRLLRWPETLARQPDAISDTLTKLRFSPEAEIVRFLPDVLDALFALCASPANST
GHLDRLAYEALISVLGIVHDRRFTGFSDALDEYIARHFSEPSAGRLVLRTLQSLLRHPED
SAAASLLRSSIKVWRWLFGLAMRADEISQSQGDDGADDSQAAFRNEVVGLLAEVNALMRT
TRPASIVGTQTLIVQHFASILPLLASVFGEEETIEVVLSFIESTGELKGKALVWRLLLLN
EVVRSSAFTSPAARAAFVPGLVRAVKACLGTFDELAMCAPNASQVARDTARTAWVEELRL
AISVLSSAIDVVQNALVYPNIRSDRSLFAQEQDNVEYLLSLVPRLLDSLDEFEDPVNADA
IERQRTPPASVLDIPITFPSSYPFPLLARSPTTGAGAAPSGSVTGRYIQPAVGEAVCTVL
ALIHLASPQTLIGWLDSLREVEGPDKLADLLSQICRLAMSTMEHDRLPETWLTFGLFAHR
TAFKFAEAVDIVVRRHFLPPEDAAFSFRTVLWEDYLSMVLSLVSSPQLTIENFSPQKRRA
VWQLSGDLRAEGAALLDRAWTSLAFVDDRSTPSSSTYGGYQAQLVPALLSKVLSTCLSQH
DTLRRVGVATLRAMILSEYELNGELDAFEAATIGHLDSLFGARDHVDAAASRTFFVAELR
QLFDERDLKDDQRTRILAFLDSIDSFLELLLSVKTLPEGDEFQEDRIASTLRLMTFIRSI
GRTDIFVRYVQRLVDYHLAAGNFVEAGLTLKLYADLYDWNNAASLDPVPDLHLPKQTEFA
RREALFNRIIDHLARGKAWETAIELATELEKQYETKTFDYVKLADLLRIKADLFASIAKS
ERQFGSHFRVAYYGSHWPASVAGKQFVHCGSETETLGAFIERMLNKHPSAQLLRTSSIPG
EEVQYGETQYLQITAVSPEYNRSHPLLASADVPHFAKAWHLHHGSTFSFTRPLAKDAHGR
SLSTNDFTSLWTEKTVLITEDEFPTVLPRSEVVEIRLIEISPIENALADIATKRDELETL
ERRYKDVMQRAEEGTKVNINPLSMALNGVIDAPVNQGVPMYRRAFLAPEMIANSPPAQVA
LVRQLETAIDELVVTVARCLKLHALLCTADMQAFHETLEKFFEKNFAAEIARLPEPAIYQ
PAGFAALSPNTASAPIFSSPSAARAYGSISITSPRSATSPPSSRNNSISAQAVDDQWLRV
KSPTSSTSPIPAPVDVRKAASVAASDKDRPFSPTRPLSLFSRRSSSPAAEPAPKAEEGSG
TGLGRRASLLSSAVKKLGGGGGGGGGAKRKASFPAVPEE