Protein Info for mRNA_6338 in Rhodosporidium toruloides IFO0880

Name: 14706
Annotation: KOG1515 Arylacetamide deacetylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 442 transmembrane" amino acids 55 to 76 (22 residues), see Phobius details PF07859: Abhydrolase_3" amino acids 184 to 416 (233 residues), 91 bits, see alignment E=5e-30

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (442 amino acids)

>mRNA_6338 KOG1515 Arylacetamide deacetylase (Rhodosporidium toruloides IFO0880)
MASPRASADAAPRKSASSPDPSPANRPGENTVSAEPKHKTRSSPALKPPVNYLRLAWEFL
LVLAFLPFHFVLFALVPSKRWRRSWTLLEATMMPAVKRIMGAMDLCGFKISARKTDKEPS
RWWLRVRYGVDFEWVEGLRGELVQGVVDDEEVQPAERVGMYSWRRKDAPGSSAGHREGNE
LVGLFLHGGAYTHNSAHPGASSSSIPSKLFKKQPRFSSMHTAEYRLLPDYPVPAALQDAA
AVYLSLLRRGVRGDQIVLLGDSSGGHLALALTRWIKDTIESRKEEALGEGWKLEPPAGLV
LFSPWADPSHSFLGHTPDTYIPRKNSCDYLFEVGAFRLHLVSSLLGSHPESFVKSPYMSP
GAADVPPGTFTTFPPCFVHYGTGERCQEEGERLVRNLRRDGVRVEAVVTEDTPHDLLLLE
MIWKKKQIKQIWDGAVGFVQTL