Protein Info for mRNA_6390 in Rhodosporidium toruloides IFO0880

Name: 14758
Annotation: KOG0605 NDR and related serine/threonine kinases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 651 PF00069: Pkinase" amino acids 246 to 546 (301 residues), 205.6 bits, see alignment E=9.8e-65 PF07714: Pkinase_Tyr" amino acids 248 to 393 (146 residues), 72.3 bits, see alignment E=4e-24 amino acids 442 to 505 (64 residues), 25.8 bits, see alignment E=6.5e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (651 amino acids)

>mRNA_6390 KOG0605 NDR and related serine/threonine kinases (Rhodosporidium toruloides IFO0880)
MAHNPLHSSGYNSRLPPPPPVLASHAPSSLAAHAGPNKENPFTLPHSHAYADPAKHLPNM
PRVEALHPSPAPTYTPPDHRPLPPSPTKTTATATVNHYTRPLGGNSRAAQQSQQAEPTMV
QLLASQGTAPAHYASRAGAGDVTMGNATGVLSWRKGQGFKEWEKLKLNSPEVKRKADVAQ
LFFYDHYFDLLTYVSSRKSRLASFQSSISSRPTLTPAEISSKWTSYTGRERVLLRKRRTK
LKVDMFHVVTQVGQGGYGEVYLARHKETNQVVALKKMKKRTLAKMDEIRHVLVERDILAS
TSSPWLVRLLYAFQDPEHVFLAMDFIAGGDFRTLLNNSGVLKEEHARFYIAEMFTAVNEL
HKLGYIHRDLKPENFLIDTTGHIKLTDFGLAAGALNPGKIEHLKHKLDEVADSPLVFRST
LEMKSIYKSIRMADARYADSVVGSPDYMAIETLRGQSYSYSVDYWSLGCILFEFLAGFPP
FSGATAEETWTNLKNWQRVLRRPHYERPEDRIFNLSDEGWDAITRLITHKDRRMSTLDQV
KTHPFFRGVDWPNLRERKAPFIPALDSEIDAGYFDDFSSEADMAKYAEVREKQRHVDAVA
ERALDAKLARGVWVGFTFKAKKEEDRLLREKEHREKQKLQEEEEESLYTLF