Protein Info for mRNA_6499 in Rhodosporidium toruloides IFO0880

Name: 14867
Annotation: K12668 OST2, DAD1 oligosaccharyltransferase complex subunit epsilon

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 161 transmembrane" amino acids 78 to 97 (20 residues), see Phobius details amino acids 103 to 121 (19 residues), see Phobius details amino acids 141 to 160 (20 residues), see Phobius details PF02109: DAD" amino acids 56 to 161 (106 residues), 150.2 bits, see alignment E=1.2e-48

Best Hits

KEGG orthology group: K12668, oligosaccharyltransferase complex subunit epsilon (inferred from 46% identity to mgr:MGG_05758)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (161 amino acids)

>mRNA_6499 K12668 OST2, DAD1 oligosaccharyltransferase complex subunit epsilon (Rhodosporidium toruloides IFO0880)
MPSRRVVSRSNTPAVSTAPADSAPSTAPAAASTSTATLAQSIKGKAKEHQSGFVGAVQDL
WDSYLEHTAPRLKLIDSFMLFLMLTGIAQFAYCFGITNYPFNAFIGGFAATVGQFVLCAA
LRIQANPANKDTFPTLSPERAFGDFLFASMLLHFFVWNYLG