Protein Info for mRNA_6512 in Rhodosporidium toruloides IFO0880

Name: 14880
Annotation: KOG1089 Myotubularin-related phosphatidylinositol 3-phosphate 3-phosphatase MTM6

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 807 PF06602: Myotub-related" amino acids 53 to 461 (409 residues), 451.7 bits, see alignment E=8.4e-140

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (807 amino acids)

>mRNA_6512 KOG1089 Myotubularin-related phosphatidylinositol 3-phosphate 3-phosphatase MTM6 (Rhodosporidium toruloides IFO0880)
PSFTGEPSPLVLRTRLYETIELVFDSLDDADAVWDSLKGLCGSFSAGGLENRYAFFCNDA
GKADKKGKGKASWDIYSAEEEFARMGMGTRSKAWRFTDINADFQFCPSYPAKIVVPAKIS
DTTLSYAVKYRSKSRIPGLVYLHWANLGSITRSSQPMVGITQNARSIQDEKLIEAIFSSH
SQHSHKFQPMSLGDPLSSSSSLDLASSGQVVYGATATNVIIDARPTKNAYANSVKGAGTE
NMLYYKNCKKEYLGIDNIHVMRSSLNGVFDALADAEASGRLDRSALRRTNWLSHLTNILD
GVLIVIRTVHLYNSHVLVHCSDGWDRTSQLSALPQLCLDPYFRTARGFAVLIEKDWISYG
HRFADRSGHLCNDRVDFVQKSGADVSTQQAFLASVTRQFASSSHAFKETCPVFQQFLDCV
YQIQRQFPDRFEWNEQLLRHLVHETYAGATGSFLFNSEKDRADLRARTRTRSVWETVFEV
DESGELKLKPEFRNLDYNPSLDNPDSKAHDADQGVLLFDPQNVRWWFELFGRSDDEMNGR
PFANDPGAAPIEPTVTEFKVVESPEDDPVTNGLIAQASSLVLSDSPASPVTSPSNFPAPL
PSSRSSSPATSRQEALLSQQQLSETVASVQKLGWSAWKSVRKFGEDAARQLQEQQAKRAA
AAAEEAERRESGFAPDERGAREAGGGGMWSKLSTSNPWATTANDEAPATTSAPIYKAYQP
RHAPDSFASTPLGPDSSASTPASAPSFPQRTQRQPSSTLSINPWETVSREEASLPDPAGP
ARPSSERPKVESEAEGRSGDPLGVGLA