Protein Info for mRNA_6603 in Rhodosporidium toruloides IFO0880

Name: 14971
Annotation: K02149 ATPeV1D, ATP6M V-type H+-transporting ATPase subunit D

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00309: V-type ATPase, D subunit
  • amino acids 8 to 222 (215 residues), 226.9 bits, E=1e-71
• PF01813: ATP-synt_D
  • amino acids 16 to 217 (202 residues), 240 bits, E=1e-75

Best Hits

Swiss-Prot: 62% identical to VATD_NEUCR: V-type proton ATPase subunit D (vma-8) from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)

KEGG orthology group: K02149, V-type H+-transporting ATPase subunit D [EC: 3.6.3.14] (inferred from 67% identity to ssl:SS1G_08580)

Predicted SEED Role

"V-type ATP synthase subunit D (EC 3.6.3.14)" in subsystem V-Type ATP synthase (EC 3.6.3.14)

KEGG Metabolic Maps

• Oxidative phosphorylation
• Photosynthesis

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.14

Use Curated BLAST to search for 3.6.3.14

Protein Sequence (280 amino acids)

>mRNA_6603 K02149 ATPeV1D, ATP6M V-type H+-transporting ATPase subunit D (Rhodosporidium toruloides IFO0880)
MSGKGARENVFPTRMNLTVTKTRLKGAQTGHSLLKKKADALGKRFRAILAKISEAKLKMG
RVMQLAAFSLAEVTYATGDIGYMIQESVTEASFRVQAKQENVSGTILPAFEVVRSGGGEG
GNAQGPNGGFGLTGLGRGGQQIQRCRETFSKAVETLVELASLQTAFVILDDVIKMTNRRV
NALEHVMIPRLENTISYINSELDEMDREEFFRLKKIQSKKKRDNAVKEEAETAARVEREA
REDAEASQTGYGAGAGAGNTDAGTSGEKNLLADKDEDVIF