Protein Info for mRNA_6710 in Rhodosporidium toruloides IFO0880

Name: 15078
Annotation: SUPERFAMILY--SSF50685

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Predicted SEED Role

"Alpha-galactosidase (EC 3.2.1.22)" in subsystem Fructooligosaccharides(FOS) and Raffinose Utilization or Galactosylceramide and Sulfatide metabolism or Lactose and Galactose Uptake and Utilization or Melibiose Utilization (EC 3.2.1.22)

MetaCyc Pathways

• stachyose degradation (6/7 steps found)
• melibiose degradation (1/1 steps found)

KEGG Metabolic Maps

• Galactose metabolism
• Glycerolipid metabolism
• Glycosphingolipid biosynthesis - globo series
• Sphingolipid metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.22

Protein Sequence (545 amino acids)

>mRNA_6710 SUPERFAMILY--SSF50685 (Rhodosporidium toruloides IFO0880)
MLTHSLTLPLAVAASLLASSASAHPNHGHHNQVRHHHAHAHAKRAFVPVREALNARAVKG
GRMQRKVRRGAQGAVLLAADSNSTSSSSDAGSTAKYSSTAIWWKEAGWVGSCGVTINEDD
MVVALPLSVYPDVSTASPLCGSSVSVTSPSTGKSVVATVVGASDRQDYTTFSKAAYVALE
GNLDVGELPIEFVVDQSKVPAGSSSASTAETTAKNAKIANVNVKQTSSASSQAPSTTAPP
KAQAVKTTAAPAPSSSASSLAEESGDDWVCDSTETGESATVTSKAAAPTADAAAAAASSK
AAADAAWAASSSSSKAAADAAWAASSSSSAAAAAASSKAAAAAAASSKAAADAAWAASSS
SSAAAAAASSKAAAAAAAAPATTKVADTSSGSNLSLLSQAGVKGFLGTNTNAILSWYHTN
AASDSTNGNSWCYYKYDDSVPGFAPSLSTMLNNFGGDATAARQAYCGLEAIVTTPDGKSA
TLYVADAFDDTWVRTPSSLDIIYGAFAQLFGSQTSNKNDVVTGATWKFTGNRNPKYAYAS
TSSLS