Protein Info for mRNA_6723 in Rhodosporidium toruloides IFO0880

Name: 15091
Annotation: K01078 E3.1.3.2 acid phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 479 PF00328: His_Phos_2" amino acids 41 to 220 (180 residues), 32.1 bits, see alignment E=4.2e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (479 amino acids)

>mRNA_6723 K01078 E3.1.3.2 acid phosphatase (Rhodosporidium toruloides IFO0880)
MSYPGQAHHPHSPGNPPLAHLIHRSHPVDEQHPYVPPGLELVQAHWFVRHGERAPVRQRL
VGVGDIPPVFSLCSVGREFRPAVLSFTPSVSPSALAGEPPSPAILPTEATTGKNVAAGTM
DVRRLTEDVGSSARGTRGGPSDCYWGELTDLGRRSTLELGARLRSLYVDQLNFLPPTFTL
SNSSVASFRSTNMPRTIESLHQIVEGLWGKEKREEGAKVEYLIRGWQDEDLYPNTSCKRL
RALDSASIAAATKEQAPVLAALDSVLEPVVGAPLRIDSSPRASGVLDTVLVCRAHGIKLP
KELEDPKTLRLLEGAICHEWFDGYKNIEFRKLAMGRLLSSLRQTLEAKANDPLEKVEKTR
LAVYSCHDTSIAGILNALDAFDNRWPPFTSHVAVELFRSASPPSLLSSFLPSFLRPSHPH
YVRLRFNARNLRLPACAPEGKHLPGSNGEVCTFEAFKDAVRDVEVSSKEWRGLCGNTVE