Protein Info for mRNA_6761 in Rhodosporidium toruloides IFO0880

Name: 15129
Annotation: K00944 AK3 nucleoside-triphosphate--adenylate kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 268 TIGR01351: adenylate kinase" amino acids 46 to 249 (204 residues), 197.2 bits, see alignment E=1.3e-62 PF00406: ADK" amino acids 49 to 230 (182 residues), 133.9 bits, see alignment E=7.6e-43 PF13207: AAA_17" amino acids 50 to 170 (121 residues), 68.7 bits, see alignment E=1.1e-22 PF05191: ADK_lid" amino acids 170 to 205 (36 residues), 54.4 bits, see alignment 1.5e-18

Best Hits

Predicted SEED Role

"Adenylate kinase (EC 2.7.4.3)" in subsystem Purine conversions (EC 2.7.4.3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.4.3

Use Curated BLAST to search for 2.7.4.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (268 amino acids)

>mRNA_6761 K00944 AK3 nucleoside-triphosphate--adenylate kinase (Rhodosporidium toruloides IFO0880)
MLAYPFSAARTASSRFGPALGRWSGCARRGLATVSKDDGQDGKKMRMILLGAPGAGKGTL
SDWLLERYEIDTIVVGQLLRNEITRGTRLGQVAERTMKQGALLQDELVLEVVQPAIEAKK
DKDWILDGFPRKKSQAVLLDEMLGKTGDELNLVASLKVPDQVIIERIEDRFIHLPSGRTY
NRKFNPPKVAGKDDVTGEPLSQRPDDDPAIVRKRLESFHHENDPLLAHYDGALVSFRGKT
SKEIWPHLSKAVEERFPNLPRRTTPRSP