Protein Info for mRNA_6776 in Rhodosporidium toruloides IFO0880

Name: 15144
Annotation: KOG1183 N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 301 transmembrane" amino acids 28 to 49 (22 residues), see Phobius details amino acids 92 to 111 (20 residues), see Phobius details amino acids 119 to 140 (22 residues), see Phobius details amino acids 143 to 172 (30 residues), see Phobius details amino acids 196 to 221 (26 residues), see Phobius details amino acids 226 to 253 (28 residues), see Phobius details amino acids 265 to 288 (24 residues), see Phobius details PF05024: Gpi1" amino acids 29 to 213 (185 residues), 168.9 bits, see alignment E=7e-54

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (301 amino acids)

>mRNA_6776 KOG1183 N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis (Rhodosporidium toruloides IFO0880)
MYVSLRRDLYGSASAEARVQAHTTYIRFFNLVWLVANDFIVGMALASYVRGNVPFLKHLA
EKLVRIYVLAYLREQLAWLSSWPMGVKLNDEVATVICGAFLFLSQLWENVFLGPVLTHLP
VQLIGLCVILGASSLLALTADLISLLTLPFFACYVAAPLVYRWSLSTLSALFNLFRGRKY
SPLCSRVEPATYDVDALLLGTILFVTISFLFPTLVAFYLAFASSRLLILSVQAVLLMGVS
ALNAFPLFALLCASNHLLDFQSSPVSYIAILSSLLVVFDEFLSPLGLLKVLGSLLSGRVI
W