Protein Info for mRNA_6778 in Rhodosporidium toruloides IFO0880

Name: 15146
Annotation: K00565 RNMT mRNA (guanine-N7-)-methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 418 PF03291: Pox_MCEL" amino acids 119 to 415 (297 residues), 290.1 bits, see alignment E=6.9e-90 PF13489: Methyltransf_23" amino acids 167 to 295 (129 residues), 34.1 bits, see alignment E=7.4e-12 PF13847: Methyltransf_31" amino acids 169 to 297 (129 residues), 56.2 bits, see alignment E=1.1e-18 PF13649: Methyltransf_25" amino acids 172 to 279 (108 residues), 58.1 bits, see alignment E=3.6e-19 PF08242: Methyltransf_12" amino acids 173 to 281 (109 residues), 43.5 bits, see alignment E=1.4e-14 PF08241: Methyltransf_11" amino acids 173 to 282 (110 residues), 42 bits, see alignment E=3.8e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (418 amino acids)

>mRNA_6778 K00565 RNMT mRNA (guanine-N7-)-methyltransferase (Rhodosporidium toruloides IFO0880)
MSLQRLLGSDETVKPSQRPYAPTKRVSPPSSVLVPISRVELAQCQTALNPLRTRPAPQQQ
SSSRLSSLPPAPASLPARPPAATNGGLPPPPSIGHKRPNRENGPDEHVAKRWRTAPDVRS
VAEHYNARPNTDRVARQDSPIIGLKSFNNWIKTVLIAKFARREDEVGPKVKVLDLGCGKG
GDLQKWAKAGTDELVGLDIAEVSVEQARSRWQSLRTRFPASFYALDCFESSIEEVLPASA
VTRPFDVVSMQFCMHYAFESEAKVRRMLENVSMYLKPGGVFIGTIPDEKQLFEHLDNAPD
PENPLVFGNSVYSVKFDQREWDSPYGHRYTFFLQDAVEEVPEYVVYWDNFVSVAAEYGLE
LRFQADFQTIFSEEQEDPHFSQLLRKMRVMDAEGNAEMDEDQLDAAMLYLGFAFTRTG