Protein Info for mRNA_6817 in Rhodosporidium toruloides IFO0880

Name: 15185
Annotation: KOG3525 Subtilisin-like proprotein convertase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 884 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 730 to 752 (23 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (884 amino acids)

>mRNA_6817 KOG3525 Subtilisin-like proprotein convertase (Rhodosporidium toruloides IFO0880)
MLALTLAWAGALSLAAFPCATAHSHRPPQPHLAVRAAAASSSSSSSNSTSSLVPAVCTPD
LCLEGQNALTAGVVVSSPVNGSTQRITLLPGTYTPSSSALSSSNSSLSSALFSRRASAKP
SNGFSSSGSLASGSSFTVQMMDGVTAYTNALYQGEATYLSLPTNSTSNSSSNSTYPSTQI
HSLLFSPSSSLSLYTILSTPSSPHLILWSSLPDFSQTKSLAAGAKVVDVQNSACVKGCSS
GGRCASGGRCVCEVGWEGKTCDTCSKGFFGPTCQPCPSGCSSCDDGLTGSGLCLSSPSAS
SVVLPSTCNCLNGLCVSNSTTATCACTAGWTTAANGTQCAACAAGYYLSSGGDCLACDPT
CATCSSPSGTCLTCQPTLQPVSSSPTTCIPSPSSQNGTFITCPSRTFFDSSTSSCVACDP
MCESCFAAGAGACTKCRSPNVLMPGGKGCVAVDAKTGVCDASKVGGSGNATASTAGGWVF
DNTKGVCDALPAKCLAGGINSFTSASTRSQLACSKCLPGSFLVNGACVDECPEGTMESDD
GTGCLACDSSCATCAYSTSFCTSCASSTSLVLNGTCITSSSCPSGFFSSPSFHSPLLPSS
SNTTAPTCLPCHPDCATCSDSPTTCLTCPSSRPVFLPSSSSCVATCAPNEFFDSTKGQCV
ACDASCGSCASAGADGCLSCPSGQKLLGGRCEAPKDGCAVIDSFGVCLEDLVTVAPRAQS
EQSQTKWKMPWWAILVLLLCVMALLVVGVLGWRRREQRRRREVTARFARDLGDKEVCLLA
SFSSAFFPKLTRVNVARRSTRNSPPCPSPSRTLPSLAPPPPLLHPSPTSPPPVLLPVAPL
HLHHTTPKSSTTSPSLPASSSKTPALQSLPLPLVHLTLLPPVHR