Protein Info for mRNA_6820 in Rhodosporidium toruloides IFO0880

Name: 15188
Annotation: K00931 proB glutamate 5-kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 508 PF00696: AA_kinase" amino acids 6 to 245 (240 residues), 132.4 bits, see alignment E=2.2e-42 TIGR01027: glutamate 5-kinase" amino acids 6 to 392 (387 residues), 346.8 bits, see alignment E=7.8e-108

Best Hits

Predicted SEED Role

"Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA" in subsystem Proline Synthesis (EC 2.7.2.11)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.2.11

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (508 amino acids)

>mRNA_6820 K00931 proB glutamate 5-kinase (Rhodosporidium toruloides IFO0880)
MVHPLTVVIKLGSSSILHPEPPHFPQIATLSALAETCVSLRALGHRVVIVSSGAIGMGLH
RMELPTLAPGKKRAIGEKQALAAIGQGRLIALWDQIFGALKQPIAQILLTRNDIADRSRY
LNATTTLSTLLSLGVIPIINENDTVSVSEILHVNKFGDNDTLSAIAAGMCGADYLFLMTD
VDGLYEDNPRRVPGARRVAKVRDIEEVRRLVSTSTLGSSLGTGGMETKLIAAELATAAGC
ATVITMGSMPTRILTIVQGHNSRTAPPSPTSSSTASLQPISEISASPPSAHVSNRPGVEF
ASPTDDSVPPHTLFMPKTSPLSSRRFWILHGLTPRGTVFVDEGAYRAITRGERDGGGGGN
GGRLLAAGVLRVEGTFAAGQAVRVCVVLKKGANKERGRSASRKDGRVPSRARSPDHFADR
SSEREEKERELARAAEGLSLRDVAAAEKAQKAKEDAEEVIEFGRGLTNYNSVEIDRVKGL
RSSDIEKVIGYFEAEHVVESICEVKRTT