Protein Info for mRNA_6825 in Rhodosporidium toruloides IFO0880

Name: 15193
Annotation: K08876 SCYL1 SCY1-like protein 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 986 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (986 amino acids)

>mRNA_6825 K08876 SCYL1 SCY1-like protein 1 (Rhodosporidium toruloides IFO0880)
MNFLSSISSSLISAGSAALANASGGVPGVQGYQLGDKVLAYEGKSIWTQWSGTKKDDSTP
VSVFSFDLSSPSHISSHDRRSLFPLARNAFRKLRALRHPNILKFLDGSETDSAIWIVTEP
VRSLALELEGHGGLSEESKVYGLLHVCTALGFLNRDGQSVHGGLRTTSVWVTPGGEWKLG
GMEVCSRLDEPDGAMWHVGGLLPDSRTHAPPEVRRGGWTALKEYDASTLDSYLLHLFLYT
IFNGPLPTSYLSPSASETPSLPQVRGSILPALFQPWRRLGNPNPAARLKTSAFLDLGNHP
GEGWWTSNRLVKLSTALEGFSLATEDERMGLIRTLKAISSGAANAKTAPLPSGFLKYKVL
PSLVHTLEFSSGSGGAPLLPVILDLSSSSDGSTNLDEKEYQRDVIQPLVRMYATPDRAIR
MALLENLERYADKLQNKDVNEKVWPHLQTGFGDVVPVIREATVKAIPLIATKLNDRILNN
DLLRVLSKTQTDVEPGIRTNTCILLSRLSRHLQTSTQRKVLIPAFARALRDPFVHARIAG
LMALMATCEVFEKEDLAGKVIPAMSICLVDREKTVRDQAFKAIDMFVKKCESLTASMPET
VLPETAQQSPALQAASQTQPGLATNAAGAAGALAGWAFASVSKKLSSAEMAAPIERRDSS
QSISSVNAPATNGATVPASRTSTDSASASPQVPGGFGGVAKGTEDWGGDLIDVNDDDADW
DEFESGQPVPARIDPFAARLSSSKPKPARGRGGSLRLGAASRSSGLRIPLDMDATDSWDL
DESGDSASVPRAAAVPSSQRPIVRKPLISATSPALLAMAASIPSSAPTSMPASPRVVPPS
SATASASIAQPKTPSIASPPFSPPSTQTAFGTPASPLHAPAPPAISVPSAATPPAQSPVS
LPRSPLPPSATPPPAPVPPSTSTVPPIATPVSPVPPPSDPPSRSSTPVSTASGTAGLTKE
EKAAKLAQAREERKARMAAAKAGVKR