Protein Info for mRNA_6873 in Rhodosporidium toruloides IFO0880

Name: 15241
Annotation: K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 419 signal peptide" amino acids 1 to 46 (46 residues), see Phobius details TIGR00329: metallohydrolase, glycoprotease/Kae1 family" amino acids 40 to 374 (335 residues), 242.8 bits, see alignment E=2.5e-76 PF00814: Peptidase_M22" amino acids 59 to 375 (317 residues), 220.7 bits, see alignment E=1.6e-69

Best Hits

Predicted SEED Role

"TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (419 amino acids)

>mRNA_6873 K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase (Rhodosporidium toruloides IFO0880)
MSRTMATARKVIEPMLRPFFASSFRRGLSTESATRPLLVLGLESSADDTCAAVVSSDRKI
LSNVVIKQHSIHESFGGIHPMHAMKAHQANMPEAISRALSEADLSLADIDAFACTRGPGM
PGCLGVCNASAKALAAATGKPWLGVHHMQAHALTPFLTASPNTDSPAPEFPFLTLLLSGG
HTLLLLARSITSFSILATTHDESIGASIDKVARALQIPWALGAGSPGAALEKFAFPADTA
SPATPSSSDLPPDPTLTIPFPREMAFSYAGIRSAVTRILDAEPPTSMSDARRRQVARCYM
EDSFEHIGEKVGMAMRKLGKEGQEVKGLVVSGGVASNLVLRQRLRAKLNSLGRPELPLIF
PPPAFCTDNAAMIAFVGLLRLQRGLVDPLTMIHEGTWPITECEADFEKKEGAEKSAETP