Protein Info for mRNA_6888 in Rhodosporidium toruloides IFO0880

Name: 15256
Annotation: K04422 MAP3K13, LZK mitogen-activated protein kinase kinase kinase 13

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1158 PF07714: Pkinase_Tyr" amino acids 883 to 1140 (258 residues), 153.5 bits, see alignment E=7.1e-49 PF00069: Pkinase" amino acids 883 to 1138 (256 residues), 150.2 bits, see alignment E=7.7e-48

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1158 amino acids)

>mRNA_6888 K04422 MAP3K13, LZK mitogen-activated protein kinase kinase kinase 13 (Rhodosporidium toruloides IFO0880)
MPALRSRKRQKVGSSMRTARSFNPDRVDEDDANDTDSDWEDQMEHERAETSARGGAAVDR
SRRASAPSGSSRSAMATRRSSLPQRREGSQRTRAADPRARGPRGGKEDSGITQQPRTTRT
GRTQHPLSPLPVNHSVERSYFPVTEKTVKGKGKERAVEEDAAMPPPRRRRDGSVPAQAAR
VTRRTSGGPVAPSSMGEPSRTTRRRSRSIVEEDEDEDEEMVTDDAPRRRLRSNSRTSLEA
ISDAEEAADGDHDDEAAVWEEEEDEEGGRASDDDDDDAMLHNWTADQLRTLRVIDLSNLF
HRLPASSTSSAAPPRLKEEYIRAIIAARRPEGSSDDGEDEADSPLPKTSHEGSPEASQPR
RRRSSSKVLSSRGADAKPVVRKKLVKRRSGARQQEPTPPPSDEAVSEVSEDDVEDTEVEE
DEVAPQAEPEPAAASTRMARRASEVEMPPPPVPRRHVRTRSDMTHVVPPSFRAPSGPSGS
GSNVAAGVKGRLLNGLQVNVTHDVFTSPVAHRTRGQQPQPPRPPQTRPTRTSPDAPAPGA
HSPRPLRLAKRKVVARITKVDKGKGRADDGDEEMHDGDADIILGSDSGSEAEESDEVEEE
SAAAGSSSQPRRQRSGSKRDPVGRRRSARTAKQVETPPSDADEESGGETEREDSRSQLAG
ADSDSDAASVHMTSHLRHDGRNKRDGKVVRLRRGKKRQAAGRDGEDERMANDSDEEPHED
EDYEEADEEEQDEDEIDLATATSTTLNRYRKDDLVRLCEERELDKEGTKPQLIKALLEWR
DKDVDASSPASIASSGSTVSNVSTETARGETKTQALNAVGHASNRTSGAKTPLLMRPDHS
ASPEKPQTPEHSKEHEHQEDVNTLDLESLQLQDKEIQPDKLTRLERIGSGGFKDVYKGKF
RNRTIAICDIRGHLTDMDIKELGLLRDLRHTNIVQFIGVSIPKQPSPIPVMIITELCANG
DLFDYIRKTDPPPFTAMLEILLGLSRGIEYLHLRKPTIIHRDIKSSNVLITHDGVAKIAD
FGLARIKTSTKSMIRSLVGTVNWQAPELWSPHPRYNEKVDVYSAGLVFWEVLQWHQAVKR
YPFEGQNEHAIYHDVGAKQIRPPAGPLRRQWGSEIVDLMTTMWEQDPAQRPSMSHVVKEL
EKLISAEKAKAREAARRG