Protein Info for mRNA_7049 in Rhodosporidium toruloides IFO0880
Name: 15417
Annotation: KOG0565 Inositol polyphosphate 5-phosphatase and related proteins
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Inositol-polyphosphate 5-phosphatase (EC 3.1.3.56)" (EC 3.1.3.56)
MetaCyc Pathways
- D-myo-inositol (1,4,5)-trisphosphate degradation (2/3 steps found)
- D-myo-inositol (1,3,4)-trisphosphate biosynthesis (1/3 steps found)
- superpathway of D-myo-inositol (1,4,5)-trisphosphate metabolism (3/6 steps found)
- 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian) (1/5 steps found)
- superpathway of inositol phosphate compounds (5/29 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 3.1.3.56
Use Curated BLAST to search for 3.1.3.56
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (603 amino acids)
>mRNA_7049 KOG0565 Inositol polyphosphate 5-phosphatase and related proteins (Rhodosporidium toruloides IFO0880) MLTLDSTGRIVVWLPDEKHGKLASLHSHSKVFQIPPDPMRVNVVGDLVWADWKVSASEAP GGLERRVVRVYDVSGTRAVLRCEKGWDVQALGGIFTFCSVPSHPQFVFAGHATGHISIWK SDGTGMLGVKRVSKEAITALCGPSRFLWVGYASGVIDVIDLGSSDRWKVVKRWRAHRGPV LSLGVDASSLWTASSLRVYSGGADFKVRFWDGLLRDDWISRRMQDTVETYCDFSPLRMAV FTWNCDGQDPALLQRTEASRSLFASFLQRLDRPDLVVFNFQELVDLSDLTLAARTVLFAT ATHDVTGRYRHWRTLLADAVERFLGPDYTLVHEDKLVGLFTVVFARRAVASQMKDLASCH IKSGFDETYGNKGSILLRFVLQDSSFCLINAHLAAGKTHPAERQRDLIQILDAASRFPRP GQATHNAYIGGGDGTEVLDCETVFFAGDLNFRIQLPREEVLRILAKSDPYSRLLPHDELT ALKHDDPAFRLRAFVEAPIDFPPTYKYDHFSSQYDTSAKQRTPSWCDRILWRTQRKESVK CLRYERFEADMSDHRPVAATFQVMVRTIDPVRADSAYRRTVHDWAEVEEELLQTARRHHP VGQ