Protein Info for mRNA_7081 in Rhodosporidium toruloides IFO0880

Name: 15449
Annotation: K00272 DDO D-aspartate oxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01266: DAO
  • amino acids 6 to 357 (352 residues), 108.2 bits, E=3.5e-35

Predicted SEED Role

"D-amino-acid oxidase (EC 1.4.3.3)" in subsystem Proline, 4-hydroxyproline uptake and utilization (EC 1.4.3.3)

MetaCyc Pathways

• butanol and isobutanol biosynthesis (engineered) (5/8 steps found)
• thiazole component of thiamine diphosphate biosynthesis II (4/7 steps found)
• superpathway of thiamine diphosphate biosynthesis II (5/11 steps found)
• L-lysine degradation V (3/9 steps found)
• superpathway of L-lysine degradation (11/43 steps found)

KEGG Metabolic Maps

• Arginine and proline metabolism
• D-Arginine and D-ornithine metabolism
• Glycine, serine and threonine metabolism
• Penicillin and cephalosporin biosynthesis

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.4.3.3

Protein Sequence (368 amino acids)

>mRNA_7081 K00272 DDO D-aspartate oxidase (Rhodosporidium toruloides IFO0880)
MPAEQVLVVGAGVIGLSTGIRLLEAGYEVDIVARDWPDDPKTIEFTSPWAGAHHVAYGTG
ADMRLHELERSTFAAMSDMMRKDASVPLHFAPQVEYREQPRPTGKDDGLSQLGLISRYYP
DFRWLESHELPDGVSYGAAFTHILIETPAYLPHLLRRFKSLGGRTHRCDSLSSLSDALSV
HPSLSRAKILINCTGLGARTLVPDSAVYPTRGQLVIVRAPWIKQGYMRSGPAREEKPATY
TYIIPRVESGTVVLGGCAEKNNWDPTPRPELAKDFKTRCLALCPDLLPPNKRGGTIDDLD
VVEDAVGLRPTRDGGIRLEVDSLASSQGGRLPIVHNYGHGGYGYQTSWGSADAAVELVRQ
ALSGKSKL