Protein Info for mRNA_7125 in Rhodosporidium toruloides IFO0880
Name: 15493
Annotation: K11315 TADA3, ADA3, NGG1 transcriptional adapter 3
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (702 amino acids)
>mRNA_7125 K11315 TADA3, ADA3, NGG1 transcriptional adapter 3 (Rhodosporidium toruloides IFO0880) MPNPTPPAASAAGPSSSAPESFRSFNIPPPPVAGSPITICTNGTAPIPSAELAKLRASLL LSRIVAAERVQVCESNQRILADRMTSGLPRESERKRRREEDERRERERSEKAERDRIERE KEERENARRVSVPAVKQEQEEERKPAKQPKDKQRASADVAQAVQGKDAGRRQGGKTDAQG DVVMSDASGSASVAATPSSAATPVSKIPLKGARPPAMSPDADEESVQPRPPRPHDKKKRK RDHILDSDASATEDDQPLLQRMRTIDSTAASSPAASTVAPQLTVTFANLNGGPDGVAAIQ TKLKEERFTKHSIPIKPPPPGSATAFYVPAHALVPPRPPAIPPASTPKRQGDVTGDFSNA KPGQQIAHSTFQNWVDAYLRPFGEDDLAFLAPKPEDLTPYIIPPLGKHYLDRWEEEDSDA PLRRHDPSYLSPLEPPVLPRLRPDALTEDALGTEHVFLGPLSERLMAALAVDEVPDVRGE DELDVPMEEGPVPPRLPMDAVDLEERVRRELRYIGILPEEDPDWGSREDDEISSALRACQ RLLHQQTSLNEARKSVLMSLVKDRMAYQDYENARDAQERVIEQGWQKRMRVDVKKKKKGK DRDRRAGGGAGGAAGAGAAGAGKDEDGSKQPVSLELLEAVERRDRLVSAFKPFFDEDEVG RYFGLPERSVYEGLEAALAAEEDGFDTAEEAEGAGSAVPAAS