Protein Info for mRNA_7199 in Rhodosporidium toruloides IFO0880

Name: 15567
Annotation: HMMPfam-Hemerythrin HHE cation binding domain-PF01814

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 204 PF01814: Hemerythrin" amino acids 60 to 181 (122 residues), 49.6 bits, see alignment E=3.1e-17

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (204 amino acids)

>mRNA_7199 HMMPfam-Hemerythrin HHE cation binding domain-PF01814 (Rhodosporidium toruloides IFO0880)
MSTYTLEQAIKPSRASVVSIQSGGKKGGKGREEEEELPDYISPEPKNAAERRDWERMSSR
MEGFHTYFRHSFRQLFELSDGSFNERGMTVRDFMRLAEDFLTHLEFHHGIEEQHIFPVLA
KRMPQFRVNHQEEHDTIHKGMHELRWLAKRFKLDPSSYSPEEFRKNLSSWGPLLFYHLDA
EVASLKPDVLRRYWTLQEAKHLPM