Protein Info for mRNA_7206 in Rhodosporidium toruloides IFO0880

Name: 15574
Annotation: BLAST checkpoint 9-1-1 complex, HUS1 component [Moesziomyce...

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 167 transmembrane" amino acids 9 to 32 (24 residues), see Phobius details amino acids 52 to 74 (23 residues), see Phobius details amino acids 81 to 106 (26 residues), see Phobius details amino acids 127 to 151 (25 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (167 amino acids)

>mRNA_7206 BLAST checkpoint 9-1-1 complex, HUS1 component [Moesziomyce... (Rhodosporidium toruloides IFO0880)
MVSERTVRLVMGPFAGFALLASIITMSIAASLEAHWNNVGFPNKSYRDRERILLAAGIWG
IIISVYSLFGTIFAPGSTAFGIFPHLITFTIAFILYLVGASSLTALTDKVTCSNAAETFS
RCNTTKALVAFGWIGTIYVFLILVFVSILGIKARSGVGARKGALTDA