Protein Info for mRNA_7231 in Rhodosporidium toruloides IFO0880

Name: 15599
Annotation: Hypothetical Protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 486 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 115 to 136 (22 residues), see Phobius details amino acids 175 to 196 (22 residues), see Phobius details amino acids 208 to 228 (21 residues), see Phobius details amino acids 235 to 254 (20 residues), see Phobius details amino acids 287 to 309 (23 residues), see Phobius details amino acids 330 to 357 (28 residues), see Phobius details amino acids 365 to 384 (20 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (486 amino acids)

>mRNA_7231 Hypothetical Protein (Rhodosporidium toruloides IFO0880)
MVTIDALPKVVASFGAAISSLPSQLISTTDVPLLSSQLSHLAADLSPALPTLGAAQQEAL
LTNATWLAGQTSQLSSLVARLPAAERNSTSHDELLALIQIASTRYDLLTVWTPDVWSLLF
LFLVAILLKTALALLLSPSAIRRARGALRGKYGVDLDRDIARSALQKPARSALGHLLNLL
VSLAALTFQLLAWRLFVLGSEPMRLLDYQYFLIALKLVLLGYAVDLVFGDVRPEIFLHHT
FTFLLMFVGQIAAYETKSAFGLTSLLPLHADTPRPAGPKFFRFAQYMLLQATLEQSTYLA
MVVYHFSTYLRTQDHRPDLQALCAKAAHKLLVFTTWITWVQKMGPAAFALCWIGSMWRDI
DGMGWGRTWLVWSTLILALLLLLQTKFCDDVKPLAAYIGYKLHGGPRPPRNGPVMRLLLS
PFARRSKAKRSDIEEGVEDSEEDKTETVCSSPALKDLEKDACVAQLDVDSLPHLSHDSRR
SSQTLA