Protein Info for mRNA_7291 in Rhodosporidium toruloides IFO0880
Name: 15659
Annotation: K16803 CKAP5, XMAP215 cytoskeleton-associated protein 5
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (2527 amino acids)
>mRNA_7291 K16803 CKAP5, XMAP215 cytoskeleton-associated protein 5 (Rhodosporidium toruloides IFO0880) MLQLPIEVFEHVLELSLPPAPLAVQEITSSAVSHHPLACWSNWKERSRTLKTIALINRHC AQWTQRELWRHVLCLDNAHVELLLKCTWLADERNRGRRRVTETVRLGSYDYGEEWAPEPP PPLDGSCLSLLLRALQPSNVQPGDGIKELWLTGMHYVDLRGIWHLQDLRFFSCVQLRLWT NDAMGGAASQTSSTRLPLLRTLVLRELEYDGTAQPSFPNHSFPSLEILDCQCAADLNFIF HCGTVSFPKLKAIHCPADLPPDWLAPFNRPRWSYSANSGDPLLCLCLDDEILQDFATVAR TSKGYFRHDLFQAFDATLGLPAMIVTEAVDFRSSLRKLHRDLFDQFNALLEAFARTSTPE AAAFTAKRARRVDCCSPGRCTVTMEGAPADGNFDALPLEDRLAHKVWKARLSAYTAVASL ASKTLDDSDPFFRERFISGPSLRDWVRDANAVAQEKGVEAACAVVEFGGKALARTRGDVV PSVVEKCLGSARANTRTKAIELCLLYVEAEEDMAEGVIADIVPGLDAKQPKVVAGSVMVL KEIARCFGPKTANFKPILKTLPKIFAHADKTVRSEGQLLCLALHSYLGPALTPHLGELKP VQQKELGEAFEAANRGEKGDEWGFGKIRPSRFTVTQKKEMAVQEAQGQLEGGDNAGAVDG GHADAADEAAAPPDVFDLADPIPVLSRLPADFYSNLSSSKWKDRKELALEPLLATLSSSP RYEPDNYADLVSALAGRMTDANVLCVMLAAQCIEKLAKGLRGDFARYKGTVTSPILARTK EKKQNVLEALGAALDAVYSSSSIGDFTEDVATFAKDKNPSVKASTLSFYTRCLASTPSSP PKTDLPQLIEVFKKALEDSDAGVRAAAADALGTLMKVIGDRAFNALIGEMDPLRKEKVNE AAEKAVTKCRNGVGAGGGGSASARSAPPAAAAPPKPKPQPRPARSSDKENAPPARPAPAA ASSFDDAPPTPAKPPVRGPPARLMAKKAPGAAAPAAPSASAPPAKKPAPSRPAPAAASAS SSAKASEPLRYKHSQEAAESLVDSGDVIPAELVAQLNDSNWKQRLEGMEKLAEWAKLDGR DAESEVVVRYLVGKKPGPKESNFQVAGKVFALLQQLATDSPTWTKACSAVSIPLLCDKLG DIKLKKPASDALVAFAEKSSLGFVLSQAYEPMSKQKAPKTLAESYVFVEQALRDFGLAGG LAVRDLIEFLKVGLKHSNAAVRTSATKALVTLRLFVGPDIVNFLSDLTPQLLSTIESEFE KAASEQSPAPTRFGADTVAPPAQAGGAAVTNGKSRSAAPEVDPMDELFPRIDFDRLVSSA QVQACNDANWKVRKEALEGIRDILEANKRLKPSGLPELGAPLKMRITDANKIIQLLALDI VSRLATGMGKPFGEKLARTFAGPVAQVLADQKANIRAAGISTLTAMADASGLEPLVGQFD KPLEANNPVQRKELLGWLDQRLQDQDSVAGHLDLGVLASGILACLEDRQADVRKSATNVL PVVIAKAGYGTVMDAVSKLKPASRSTVLPIVENARSAASSLGSTPASAPAAAPARSAAPA ARQAAPPARLSDPPTAPAAPSAPQPRLPAGLSRPTAKPLRTAAAPPAEDPAPAAVPTRLG QPRPRPSVGGLRAAASASSSRPASTVSTSSAASVKEPPFRSSDPNPKLLRHKKETGSMRW VVEGTPRPDQVDWLAGQMAPQVSASLHAQLFSTDHSAERDYIAALGAIDECARDPAAAGE AVDLDEEEMRARLIANFDLVVKYITLRIGMTSTTITVKCLDVIEHSIPVLSAAGYKASDY EVYPLLVSLINKVGDGKEIIRQRVRGIFKAICSIYPFSKVFSTILEVGLENKNARVRSEC IDELGQLYARHGVGVHPISQALPKIASFIGKPDATGRTAALHAIGAVYTLVGSDATWKAV GQLPPKDRSMLEERLKRTASGAASPAPAARQPVTADRPGTPSCLRPPTSRLAPPSSPSPA NGLSTSQGRGGIPRPAGIPSRLARPASAAEGSTPRKMMPPPTSRFGAPAQTTSRPASSAS FAPFTEDDLAAETVSDLSMLLEALDTDDFGECADVLKSITREITSNAENVLLHADALIDA ATAKMELGFTSLSAATSPAQLRLCKHLMQVLSAFFDKRTLSQQVSRLPLTGLLADLTGRL LDTADNPVSEPIQSLSKVLNMVLIRIFHNADQNVCFGALLTVLQDATVDLRDLRGEELAD RAKYAELVMKCLWKVSKTVKESLENRNLLAPRLLSDINQFLMTIPPAEWRRRATDNIPLA DMPLRTVKTILQQVVSVLKGKVFDELGEVDQAENSFVYQYLHRLANQPSGSDTNGRPSSS ALSRQTSSASLDSQRREEPAKSSPAESPPRTTARAAPPPLTSPGGSDIAVNQRLKEIFDM IGDPNNSRAGIAALYEFQKEHPEAAPRIATWMAGTGSYFQTYLKRALANLEAADRERGVE TPASPTSASSSTSTRPSSRPTSSASAAPGTPTRSSRLSLGPNAVSSTPQQSARLQELHSV FGFGQKE