Protein Info for mRNA_7364 in Rhodosporidium toruloides IFO0880

Name: 15732
Annotation: KOG1337 N-methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1108 PF00856: SET" amino acids 684 to 916 (233 residues), 29.3 bits, see alignment E=5.7e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1108 amino acids)

>mRNA_7364 KOG1337 N-methyltransferase (Rhodosporidium toruloides IFO0880)
MATPADSLEAGTSSTAVDTPPAQPFRPAKLPPPPLYTTSTSRPFSRSALKRQSVMALPSI
QHLQHGFAKLGLKEVKKRGEAGARRRSGGTGEDKENEGRIGGLAGMAEEEEDGEEGFEGV
LGPEPPKPEVDLRMPWEKEGVEASLRDSKELRREAEEALDVVCDKWGLAAPASTCSELVN
APTDPLHAPREASTVSSASTASTSSQTDNSNSAPLSPLTSFSCTSDSQVPLVLTLLTLTT
GAIRTTQQFVLSLPSTSSSTSTAISPDPPQISTASRPRTSLASPFTTAAAMSRSSSSGSN
QGNPAVIEADEQATLLAELRKKSLEVLGILREMEGRYRLPVPGRLLADEGEGMVASPLDA
EAPALPSSAVTAEAAVEDEPIYRSDIALSSLAAEQDVVREWVRAVNRVLDQTAEAGKTRR
SKAADGGPQEEVPEWARKDGWEDSLARAHAIIVTHLSPEQTSSLPNLASDRTGFLDALSD
GYLLCLAYNAALRLSSPHPFGFISASSIHPFSSISSSSVEMSCTASSASDGGGGGEKIGQ
TFRRAENLRLWAGALKHRYNLALAGPPPFDPKVVAARKEEGRRDGLERAVGEWAEDLANE
VRREEEEPRETGRRRRRRRVGSAVFTPIAVLLRAKGTRRRPSLASSPLPKMTGPSCATTP
LGSWLTASGGSYHPALEARPDSFGTCVYASEPLEKGCKAVCCPFSLAITPKQARRCVPDT
LLPSSPSSSRPKRLPDHEIMTLYLCLHLLPKPAVERVSGLVLEHQPYVDFLPKSEAMRTP
LYFTPAERELLRGTNLYGATQEREDDWRAEWREVTSWVTDEEVRKELTWERWLWGCTILS
SRAFSSDLIDGDKDNSTPVLFPGVDLLNHRPEARVTWFSDTETEIKRVDGRVEKGSLTIV
LDEEIPAGAQVYNTYGAKANEELLLGYGFVLPSNRADFLTLKLSMPLNASPSLLSLWETL
KLSDTRHYVPRSGVLPDELLAQMRLLLAQPDEVEEIQERLRKGASGWSEALDFVSWENEL
DVLDMLGAMLDSKAQALTAGGETVTDEDVRPEVSETVDIYRRGQVDVIQAAIEYHERLFE
ETRRKAEEAGVPFDEDDMEDVDEEDEDH