Protein Info for mRNA_7408 in Rhodosporidium toruloides IFO0880

Name: 15776
Annotation: K18422 MOV10 helicase MOV-10

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 983 PF13604: AAA_30" amino acids 438 to 645 (208 residues), 31.5 bits, see alignment E=3.6e-11 PF13086: AAA_11" amino acids 438 to 507 (70 residues), 48.2 bits, see alignment 3.4e-16 amino acids 598 to 650 (53 residues), 28.6 bits, see alignment 3.1e-10 PF13245: AAA_19" amino acids 454 to 643 (190 residues), 25.5 bits, see alignment E=3.8e-09 PF13087: AAA_12" amino acids 658 to 888 (231 residues), 125.8 bits, see alignment E=4.6e-40

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (983 amino acids)

>mRNA_7408 K18422 MOV10 helicase MOV-10 (Rhodosporidium toruloides IFO0880)
MARKKGVPQRSGLTRADYERTQREEAEKERLEEEERRRRQTALAAMVQARGPSSGIVQST
PAPPLPLAAAVAAPFALQHTPSPPVPLATAFLPSVPPPNLAGSAYVPTMQPAYAPAGPPM
PQPGSYGPSSLPPPPQTNSLQPQQQPKFERPPGLNRYAELYIPVWLRRVNADMPFQTIPR
SPAESFSIDYQPLHNAIYPPQLISHLQDIERANSSHILRDHFTRSRAQSPSSGPGRPPAL
PLAPQTYAGHWLPLQQAEYTARGLQLQQANLYAVPLRPVVRHPADPPGPPLYILEARSIR
EGWPPVDLGDILNLRQLRPAYSTWQGLEFHASVAGINRAAGEVMLRCDGLRGYEESMVFN
VIWRVQDRIFNEWRHSTELLQLYFGSEKAATSVADGTPTKRRRTAVESWLFPEKEDVSLD
ASAPTKEDIEPEWVDSSLNEEQRNAVRSILWGRHRCPLLLHGPPGTGKTKTLVEGVFQIL
ARHPDAHVLVCGASNPSTDTLAMRLRALGPKNLFRLNSPSRPFAEVRGELLPFCHVENDR
FALPNMSTLLSKRVICCSVLDASILLKGRVTNHDLSSLEVYTAGSIHPHKPTPLAQPHFA
YLLVDEAAQATEPDIACALNVVATDDSRCHRAHVTVCGDPKQLGPHIVSEEARNQDFDVS
LLERLMERPVYADHPYSRRNRSRHPDVRWEIKSTPFVDLVRNFRSTPEILWLPSTLFYHE
TLIPNASRSVQESPLRAWSRLSNPGFPILFQHVNGQDMDIDEGASFYNIEEVDAVVSLIL
SLVRPPVDQSAHGIVAAKEISVISPFREQVWRIRLALRAVRLGEVDVGNVEALQGAENRI
VIISPVRSKELRWLPIDRAQDRGLLHAPKRFNVAMTRAKELLMIVGNAQTLTADPWWLAF
YRLCVRNNCYVGPPLASPAANEAGHAVSKLEQRYHAERSSRNSPALSPGANGEPDGDDRQ
AQEKAFDILIGRLVSATVNEDES