Protein Info for mRNA_7433 in Rhodosporidium toruloides IFO0880

Name: 15801
Annotation: K10356 MYO1 myosin I

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1392 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF00063: Myosin_head" amino acids 48 to 712 (665 residues), 792.1 bits, see alignment E=1.1e-241 PF06017: Myosin_TH1" amino acids 770 to 968 (199 residues), 192.6 bits, see alignment E=1.4e-60 PF07653: SH3_2" amino acids 1071 to 1123 (53 residues), 37.1 bits, see alignment (E = 5e-13) PF00018: SH3_1" amino acids 1073 to 1118 (46 residues), 43 bits, see alignment (E = 7e-15) PF14604: SH3_9" amino acids 1074 to 1122 (49 residues), 39.4 bits, see alignment (E = 1.1e-13)

Best Hits

Swiss-Prot: 60% identical to MYO1_ASPCL: Myosin-1 (myoA) from Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)

KEGG orthology group: K10356, myosin I (inferred from 60% identity to act:ACLA_059080)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1392 amino acids)

>mRNA_7433 K10356 MYO1 myosin I (Rhodosporidium toruloides IFO0880)
MAPTRKGKKAAAGATGGAPAASSRKGAGGKFAKADWKEGFKKKQAGVSDMTLLSTISNDA
INDNLKKRWENGEIYTYIGHVLISVNPFRMLPIYDETTLRSYRGKNRLEMVPHVYAIAES
AYYAMRSYGDNQCVIISGESGAGKTEAAKRIMQYIAAVSGEGSGGGGIEDVKEMVLATNP
LLESFGCAKTLRNNNSSRHGKYLEIEFDAQGAPVGAMITNYLLEKNRVTGQIKNERNFHI
FYQLTKGASSAQRDAYGLQGPEAYAYTSKSGCLEVPGIDDTYDWAETLKAMQIVGLTQEE
QDNILRMLAAVLWIGNVEFAPNEEGNSRVRDTSVTDFVAYLLEVDPTRVANALTSRIMET
QRGGRRGSVYEVPLNQAQAAAVRDALAQALYNNLFEWIVSRVNVSMKSKTQSSTIIGVLD
IYGFEIFDTNQFEQLCINYVNEKLQQIFIQLTLKTEQEEYVREQIKWTPIDYFNNKIVCD
LIEEKRPPGVFAALNDACATAHADPAAADNSFTQRLGGVSNPQFETRGSKFLVKHYAGDV
MYTVAGMTDKNKDVLSKDLLDLVASSGNQFLQTLFPDRPDPNSKKRPPTASDKIKASANA
LVDKLMRSQPHYIRTIKPNQNRSPSEYDTKAILHQIKYLGLQENVRIRRAGFAYRNTFEK
MVERFYLLSPATSYAGDYIWQGDARSGCEQILKDTGIAREEWQMGVTKAFIKNPETLFAL
ESMRDKYWHNMAARIQRAWRAYLRRKNDAARTIQRFWLGQKENIVYSQLRDYGHQVLGGR
KERRRYSLVSMRKFLGDYLGVGERDSVEGSRLRSAAGIASNETVAFSSRAELLVSKLGRS
SKPSPRYLILTDKAVYILISQAVQNQVQTTLERKIPLVTIRSVGLSNLRDDWMALNTTSQ
EEGDPLISCVFKTEFLVHLQQRTNGAVQINIGPTIQYSKKKGKMATISFKKDESIQRGDV
YKSSTVSVPSGQPPTSQSDPPCPRKPRQKKAAAPRQASRPTGAKRPTPQSLPGAAGFGAV
PAAPAGIPRAPPAPQAPAAKAAPASSGRIAPPPPTRAPAPPPPPPEPEVERYKALFTFET
DQPGELPLKKDDVLEVVTKDDGGWWLIKKGSQEGWAPSNYLQLIPPKPKPAAPPPAPVRR
APPAAPSAPSAPKAPLAPAIPAVPAAPKAPAAPKAPAAPSAPKAPAIGLGSRTGDGNAAP
VAVMPGMGNSGGLAAILAAKRAQAGEENGASTPASSGGGSPAGSRPGSSLGKPPVAPKPK
PSIPQKPGGMNGRAPAPPPPPPASNRAPAPPPPPPAPGARAPVPPPPPAAGRAPPPPAPV
RPGAPPAIGGRAPAPPPPPPPPPPPGPGRPSANGAAQPAPAIGSLVKPTANDLAAALAKR
SGRAAVQDDDDW