Protein Info for mRNA_7469 in Rhodosporidium toruloides IFO0880

Name: 15837
Annotation: K20403 TTI1 TELO2-interacting protein 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1226 transmembrane" amino acids 766 to 787 (22 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1226 amino acids)

>mRNA_7469 K20403 TTI1 TELO2-interacting protein 1 (Rhodosporidium toruloides IFO0880)
MAGLFARPAEAGGVQRDAQRQAVFLEFKAVCVPLLDAARQPTVAATTRTIVELLNKLTRL
IEEAPDDLFTPALANYAFFPLASLLQPAVGGADRGDLVLEATASTLAALVPKWRNAGMEQ
RVRQELWIMVALKLGGPLDPKGPKQAGKVDKGKGKAIERTEEASLALVRVLLALMRPAGR
ETASVGQDEEDSLGENIDWDKVDPANPSPFARPPLVDEDRPPPVPILFHTLTTLLTLAAE
PTSLLQLQLSSLEALDVLFAFYLSRHDLSTTSAPAAGPSPLLATALPGSASTLSRIAVSK
PSSSQRADQDHRRRQAIPVVVAALECLARLIIQTVGDGLTSDLRSEDGSQGQAPLASLEE
LVTGQHVNGSSAEGMDEESGEAGPSTSTEPPPAPPAGPTIPTASWLRFTVSSLSTLFSAL
SPLASHDSPTVRIALVDFLSSIISRCGQSLDEAVEGPLEGLLLLASDEWDDVRGPARRVL
LAASTQPTGDTIESRHPLALAARIVRRRLTGLPRSLRQRDEQAVRHGAGIVRSALEILPT
LQAGDTGAGVFEGIDRWSWMLLDAIELERVPAAGRAVEGGMALAWITGADATETSQTAAT
FPPIRLRGISESKTVEALDSLWQALGRMAASSERLGDAAEQFLGAALGPRRGDPSAVTSL
WVLDGVLRGAQVDQISKTNKKVLRQTVRAVLSLLEELEDVDVDAPTDEATTRDDVNVEHL
EVAETDGATPQLIVHTAGVIGTTSLDDYKPVASVSSLREARASQRLLLEALALRLLATGA
SLLGSSFQPLLMQALYHVLAYLSPTTHPFLRAYAQATLQAISDATAYALPQNLVLANVDY
VVNSVSQHLSVSRLEPSAPLVLVEMIRLVGKPIVPMVQDLVDDVFEALDDFHGYDEITVG
LWAVLDALLKVMEEDLPPPRSHRAKDAAQADADSDWRAFEKWYVTRQDQAKGDEDDLEEI
NPQRPFKSGFKSNKEREDGPAEFPSDTVTPPTKPQVVTAQILSKAMYFLSHQSPFLRARV
LSLVASAVPLLARPALEATTTAGTRASDLLPVIHRAWPFILNRLADPELFVVVEAAALVE
SLASHVGEFMARRILDDVWPRFRILLTKQELEDRKSAIANSTRYSSSHRLYRSILRTLLQ
VARDVPLKEDVLWEQAVLARRFLSVKVDPKLQVCASELYKALGLINPDAIWLVLAGTVGL
EASLPVHLHILDLDFGSNVDLLLEQL