Protein Info for mRNA_7471 in Rhodosporidium toruloides IFO0880

Name: 15839
Annotation: K00838 ARO8 aromatic amino acid aminotransferase I

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 602 PF00155: Aminotran_1_2" amino acids 159 to 591 (433 residues), 67.9 bits, see alignment E=5e-23

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (602 amino acids)

>mRNA_7471 K00838 ARO8 aromatic amino acid aminotransferase I (Rhodosporidium toruloides IFO0880)
MDDSFALASPSYAAMDRPESIDLSHHLSHLAKSRIASPLKGMYKYFQRPGMLMLAGGLPP
PELFPFETISATSLQRNSFKTTQVGFGQWLWNWFAGLAGKTDEWTIRKWEEEKDKIQLSS
ALQYGAFCFHRCTGDWEKRMTAVLPKNGARALLRTLKSLPRAGTAAGLPALARFIYEFTS
HVYRPGTSDFRTVINAGSTDAWGKIVTTLCNPGDGVLAEEWTYPSALATAWPNGIKPVPL
PMDGKGMTPEGMDELLANWNPDEHEGMPRPRLLYTIPVCQNPTGATMSLERKKRIYEIAV
KYDVIIVEDDPYYFLQTGEYEHDEALRAAARPKVTESDDEFLKSLVPSYLNIDYQGRVVR
IDTFSKTICPGSRLGWTTCNPIFAERLERANESSTQSASGFAQALVGKLLAEEWGLTGYL
RWLKGIKAQYRDRRNTLVDALLDISHASLDARKTSNGTYEFWTRGSGSLSEKGTMRSEKG
AVELRKRRILSFVAPQGGMFVWLRVHFASHPEYNSKPTTDLLGALWEDLAEHNVLVAPGT
MFSARTFGPGDAAPGFAQADEHLAVTEDGDGFFRMSFSSATPEQMKEAAKIIGDRVTKFF
KD