Protein Info for mRNA_7547 in Rhodosporidium toruloides IFO0880

Name: 15915
Annotation: Hypothetical Protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 493 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details transmembrane" amino acids 48 to 72 (25 residues), see Phobius details amino acids 93 to 112 (20 residues), see Phobius details amino acids 132 to 151 (20 residues), see Phobius details amino acids 171 to 194 (24 residues), see Phobius details amino acids 252 to 274 (23 residues), see Phobius details amino acids 308 to 333 (26 residues), see Phobius details amino acids 353 to 373 (21 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (493 amino acids)

>mRNA_7547 Hypothetical Protein (Rhodosporidium toruloides IFO0880)
MPTASDVQAALAHLLSSLPPGSNPFNALHRWLWTTLKHDMPRSFYIQLYILMGIFAFNFI
VLAISIGLQIAYKRFWVWRVEAGSLRPHASHTWAIPIALYYPLAIFTIARSLPWYRGTGL
VDEYIGLRLTMFWLPGSGAWLATHALAAGYIQHVYMNSPDSSGANKAQRRLTWGVLLEWL
AFLISMAPFCAIAHRHWTKSLDMVRDIDAKLLQQAATFTGSFSTNDIAWLGPALLARGEQ
QLKVIKSVRIVFGLYAGWLVVLISFIDVAGGLHLRSLGQILKRFESIRLDGQLERGDRRQ
MRIFRQTYAGLVGTVAVFTMVCLGMMAFALFVAVRPQQALTEPTSMQAVDLGIYYIHAVF
GGIIGLILLRFTLTTTIFAQPGDHSLSISDPTSQSCGGTFSASKHASRSTKRAHQLTGIG
VSTVVEIRHEDGAEVGGEHFELQPASGFFTPSSGSDDAKLDEKQLDRLDEAEEKGVSELY
FLDLEGKREEGRR