Protein Info for mRNA_7558 in Rhodosporidium toruloides IFO0880

Name: 15926
Annotation: K00485 FMO dimethylaniline monooxygenase (N-oxide forming)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 576 transmembrane" amino acids 44 to 67 (24 residues), see Phobius details amino acids 88 to 107 (20 residues), see Phobius details amino acids 459 to 477 (19 residues), see Phobius details amino acids 508 to 527 (20 residues), see Phobius details PF00743: FMO-like" amino acids 90 to 408 (319 residues), 56.2 bits, see alignment E=9.2e-19 PF07992: Pyr_redox_2" amino acids 90 to 291 (202 residues), 52 bits, see alignment E=2.6e-17 PF13450: NAD_binding_8" amino acids 93 to 133 (41 residues), 33.4 bits, see alignment 1.7e-11 PF13738: Pyr_redox_3" amino acids 93 to 294 (202 residues), 45.3 bits, see alignment E=2.9e-15 PF13434: K_oxygenase" amino acids 169 to 290 (122 residues), 28.4 bits, see alignment E=3.8e-10

Best Hits

KEGG orthology group: None (inferred from 47% identity to mgl:MGL_4008)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (576 amino acids)

>mRNA_7558 K00485 FMO dimethylaniline monooxygenase (N-oxide forming) (Rhodosporidium toruloides IFO0880)
MADSDHSDDTAVNSSPRQTPRRTRTHSRRPSSSPGIFRAPLHAAYSLVHALVYAPIAWIS
FAFYVLYQEAIRCVFASRGPHIPRDKPYGRIAIIGAGLTGVSTAAHAVDHGFEVVIFEAE
EGVGGVWARENSTSQLQLNSILYRFHPSVKWSRGFPKRDEIISQIKAVWDRYGLESRTRF
GYRVTKVKRDEKTSTDPRQGGHARWIINDGEEGVFDAVVCALGTCGDPKLIELEGQDSFA
GPIVHSSQLDDADLEGKKVVIIGSGASGVEAAELAVAKKAGDVVMLARSDKWVIPRNTLV
DILLSLQPFGREMPLSFIPEWLIRKFHYRDLQDLSPSSKGLFEGTPIVNDEFLQHVRQGK
VTYKRGDTKRVVRQGIQFVERERGSKSGDDGDETLISADVLIIATGYKRPSIDFLPKDLF
PTDEDRSYAPPSLYLQNFATEDWSILLTNASYQDGLGTVGNWHIGLLARILFVFLLDEST
RPKPAAMKTWVDVINWIKREAWGESSSGLTFFTYSEMCLWILIFHFFNPRRLPWLFFIIF
GFGVRPGTPHTASVEGIKHAEEVAVGIERRVRGGRR