Protein Info for mRNA_7580 in Rhodosporidium toruloides IFO0880

Name: 15948
Annotation: KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 318 PF03765: CRAL_TRIO_N" amino acids 23 to 66 (44 residues), 40.3 bits, see alignment 3e-14 PF00650: CRAL_TRIO" amino acids 92 to 255 (164 residues), 123.1 bits, see alignment E=9.1e-40

Best Hits

Swiss-Prot: 59% identical to SEC14_SCHPO: Sec14 cytosolic factor (sec14) from Schizosaccharomyces pombe (strain 972 / ATCC 24843)

KEGG orthology group: None (inferred from 56% identity to cci:CC1G_11377)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (318 amino acids)

>mRNA_7580 KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins (Rhodosporidium toruloides IFO0880)
MAAGRYPTSGHPGNLTQEQKATLQQFKQELAAEGYYDPAKHDDAMLLRFLRARKFDLAKA
KIMWIDTQKWKQSFHVDELYETFDYKEKPEVDKLYPRFYHKTDKDGRPVYIEQLGKLDLT
ELYKVTTPERQMQSLVVEYEKFQRERLPICSELQGHVIETSCTIMDLKGVGLSQFWKVKN
YVQEASAISQNNYPESMGKFYIINAPWAFSTVWSLVKGWLDEATVAKIHILGSSYRDELL
KQVPADSLPKFLGGECECAGGCSMSDAGPWKGKSKEETVQALEKLKQSVSVERGDEQGLI
AGPGQGSAVVPQSTAVQA