Protein Info for mRNA_7616 in Rhodosporidium toruloides IFO0880

Name: 15984
Annotation: K00706 E2.4.1.34 1,3-beta-glucan synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1763 transmembrane" amino acids 402 to 423 (22 residues), see Phobius details amino acids 443 to 465 (23 residues), see Phobius details amino acids 486 to 504 (19 residues), see Phobius details amino acids 511 to 534 (24 residues), see Phobius details amino acids 572 to 592 (21 residues), see Phobius details amino acids 624 to 648 (25 residues), see Phobius details amino acids 1237 to 1258 (22 residues), see Phobius details amino acids 1291 to 1312 (22 residues), see Phobius details amino acids 1332 to 1349 (18 residues), see Phobius details amino acids 1382 to 1402 (21 residues), see Phobius details amino acids 1409 to 1426 (18 residues), see Phobius details amino acids 1498 to 1519 (22 residues), see Phobius details amino acids 1530 to 1558 (29 residues), see Phobius details amino acids 1570 to 1593 (24 residues), see Phobius details amino acids 1601 to 1624 (24 residues), see Phobius details amino acids 1677 to 1703 (27 residues), see Phobius details amino acids 1726 to 1750 (25 residues), see Phobius details PF14288: FKS1_dom1" amino acids 258 to 365 (108 residues), 141.7 bits, see alignment 1.7e-45 PF02364: Glucan_synthase" amino acids 758 to 1561 (804 residues), 1286.9 bits, see alignment E=0

Best Hits

Swiss-Prot: 73% identical to FKS1_CRYNH: 1,3-beta-glucan synthase component FKS1 (FKS1) from Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1763 amino acids)

>mRNA_7616 K00706 E2.4.1.34 1,3-beta-glucan synthase (Rhodosporidium toruloides IFO0880)
MAYHQQGNSFGRDPSNPFGSNHGHAHLAQTHDGAPGYSQGAGAYESGDSDEYREQYTSEE
DARRGACRLLSLASPWTPLRRIAWLAGRSDSPAGFSDYESSSAHNAANGATFARLREPYP
AWSNESQIPLTKEEIEDVFIDLANKFGFQRDSMRNMYDHLMIQLDSRACRMSPNQALLTL
HADYIGGEHANYRKWYFAAQLDLDDAIGLANNGVARLARKASRKAGVKSVATPASVKTLD
SAKQRWQQAMFQMSAYDRVRQLALYLLCWGEAAQVRFVPECLCFIFKCADDYYRSPECQA
RTEPVPEGLYLRAVVRPLYRFIRDQGYEVVDGIFVRREKDHEDIIGYDDINQLFWYPEGI
SRIVLADKTRLVDVPASQRFMKFDKIEWHRAFFKTYYERRSFLHLLVNFNRIWVLHISIY
WMYTAYNSPNIYTPAGQAKPNPAMQWSAVALGGAVASIIQIAATICEYSYVPTTWNNTSH
LIRRMAALLICLAITLAPTIYIAGFDQTSLAAKIVGIVQFAFAVFFVVLFSVVPSGRLFG
DRVAGKSRKYLASQTFTASYPKLSLRQRVASISLWVLIFGCKLTESYFFLTLSFENPVRV
MVGMRVTACSDKLFGSALCRYQPAFTLAIMFCMDLCLFFLDTFLWYVIWNTVYSIVRSFS
LGLSIWTPWKDIFERLPKRIYAKILATSDMEIKYKPKVLVSQIWNAIIISMYREHLLSID
HVQRLLYHQVPSEQDGKRTLRAPMFFISQDQQGLKTEFFPPGSEASRRISFFAQSLTTAV
PEPLGVDAMPTFTVLTPHYAEKILLSLREIIREDDQKTRVTLLEYLKQLHPIEWDNFVRD
TKILAEESDPIDEKTDKKTDDIPFYTIGFKSAAPEYTLRTRIWASLRAQTLYRTVSGFMN
YSKAIKLLYRVENPEVVQLFGGNTDRLERELERMARRKFRFVVSMQRYSKFSKEEIENTE
FLLRAYPDLQIAYLDEERPRKEGGEPRIFSALIDGHSEIMPDGRRRPKFRIELPGNPILG
DGKSDNQNHAVIFHRGEYVQLIDANQDNYLEECLKIRNVLGEFEDYHVSPKNPYTPEGAK
DFSKNPVAIVGAREYIFSENIGILGDVAAGKEQTFGTLAARSMAYLGGKLHYGHPDFLNA
IFMTTRGGLSKAQKGLHLSEDIYAGMLANERGGKIKHTEYYQCGKGRDLGFGTILNFQTK
VSSGMGEQMLSREYYYLGTQLPMDRFLTFYYGHPGFHINNILVILSVQLFMYTLTFLGTL
NSSLPICQYTSGGQFVGGQGGCYNLVPVYDWIKRCVISIFIVFFIAFLPLFLQELTERGL
YRAIIRLGKHFLSLSPFFEVFSTQISSHSVISNLSYGGARYIATGRGFATTRISFCILYS
RFAGPAIYLGMRTLLLLLYITLSLWIRHIIYFWISIIALCIAPFLFNPHQFSLGDFIIDY
REFLRWMSRGNSRAHANSWIGYCRLSRTKVTGFKKKRMGHPSEKLTPDTPRARWKTIVAN
EILAPLALAIILTVAYLFVKSLADPQVDALLRIAVIALGPIVFNLVLLFVLFFVSLFAGP
LCGGGKFGSVMAGIAHIGSVVGMIGFFEFLWVLERWNTSHAVLGLIATIAIQRCIFKILI
AVGISREYKSDQINRSWWTGKWWGSGLGASAWTQPVREIVVKVTEMSLFAGDFLTGHILL
FALAIPCLIPGFAQLHSIALLWLRPSRQIRAPLYSIKQARQRKSIIARYGILFLLAVVVF
AALIVVPLVLKSTMDLALDGINL