Protein Info for mRNA_7704 in Rhodosporidium toruloides IFO0880

Name: 16072
Annotation: K02214 CDC7 cell division control protein 7

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 671 transmembrane" amino acids 506 to 522 (17 residues), see Phobius details PF00069: Pkinase" amino acids 174 to 334 (161 residues), 72.5 bits, see alignment E=4e-24 amino acids 483 to 644 (162 residues), 66.9 bits, see alignment E=1.9e-22 PF07714: Pkinase_Tyr" amino acids 176 to 334 (159 residues), 42.1 bits, see alignment E=7e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (671 amino acids)

>mRNA_7704 K02214 CDC7 cell division control protein 7 (Rhodosporidium toruloides IFO0880)
MTATAPLAQGHALNVPTHQRVTRSASNLRKQIQPSSANSDDDDGMHDEVVLAPLPSRSQD
DQLSSQTRRQLARPGSSTLDERVSDAEGVAGQALAEAGHGRGSSWYGSQDESLEADGAAD
VEDEELDDEDDGEGEQEEEDSEAGDDSRSEGELQAIGAEMDALEQAVPGLLGKYHLTDRL
GEGTFSSVYKAIDLQNRSFDNSQWKPVERKGKVYVAVKRIYVTSSPVRIHNELEILHDLR
GAPNVAYLIDAIRHEDQVLAVMPFNRHQDFRTYYRTASLPLLRSYFSCLFRALTSTHQLQ
IIHRDVKPANFLYDVTTGTGVLCDYGLAQKIGGDEWFEWKSDCLHSLPGPSYGGLEGRAR
AQRKMEKNPNACPGLCSGLHGVRLAKPISLYEQAVAMENEWEMWDLKMRDKEDRGQTVTD
EDWDALEAYKPWEMPPGWRSDIKRRIQERQEFYKSWRPALSVAAQKAKQKPGYLKEDRRP
SVRANRAGTRGFRAPEVLLKCPDQTVALDIWSVGIILLCFLTRRFPFFNSNDDTEALAEI
TAIFGKRKMERCAALHNRTFQTNVPDYDSPPHANLHALVKTLNPPIMVENSPDPYGPIPS
PDEEINKWYPDSDLYQVVDLMKRCLELDCTKRWTAQECLEHPFFRGEYDIGLGRTVFRES
AYAAIDNESSA