Protein Info for mRNA_7715 in Rhodosporidium toruloides IFO0880

Name: 16083
Annotation: K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 543 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF13450: NAD_binding_8" amino acids 56 to 135 (80 residues), 38.4 bits, see alignment E=1.8e-13 PF01593: Amino_oxidase" amino acids 76 to 386 (311 residues), 30.6 bits, see alignment E=3.5e-11 PF07156: Prenylcys_lyase" amino acids 170 to 528 (359 residues), 217.9 bits, see alignment E=3.6e-68

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (543 amino acids)

>mRNA_7715 K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase (Rhodosporidium toruloides IFO0880)
MLLSLPVLLGILISPANSQLLFPVNSAQTPFEAPLRDCSGKAGRRWNVARPPRVAIVGAG
AGGSSAAYFLRHFGDLKGAGLETEVTVYDQSDYVGGRATVIWPWNDDPFTSPRNTSDFPV
ELGASIFVSANRNLQKARKVFDLAEDAYGGEEGGMAIWDGERFVLEEEKLGWSWWQKAKL
IWRYGRSPFTVRSLVQKTVADFVSLYSLEFVSRGAFTSVSNFTAITGLQEPASLHADEFF
GKQGVADLFTNEIISAATQVNYGTPIHRLHGVGALVSLAATGAVSVRGGNRQIFENFVGR
SGARLRLGDNARVQSILKLDAPRSGRAQWVVRTVSGVGSGTYDAVILAAPFHQTGIQMVN
SLAPSRIPKQPYVPLYVSFIMTNASAPQASYFGLPDKTVMPVEIFGTFTTSSSSKPTFNS
LNYLRALSPEASARLGEGTFHIVKMFSDRPLEADMLDDLFGQGNVAKMVVKRWLAYPKLE
PVTKEDDFAPVRPDEGLYYPNSFERLISTMETATVSSFNAVSLLLNDFFGYVPPTSWAEW
DNV