Protein Info for mRNA_7799 in Rhodosporidium toruloides IFO0880

Name: 16167
Annotation: KOG1738 Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1354 PF07653: SH3_2" amino acids 23 to 73 (51 residues), 30.4 bits, see alignment (E = 7.6e-11) PF14604: SH3_9" amino acids 23 to 74 (52 residues), 45 bits, see alignment (E = 2.4e-15) PF00018: SH3_1" amino acids 23 to 70 (48 residues), 43.4 bits, see alignment (E = 6.3e-15) PF00536: SAM_1" amino acids 607 to 670 (64 residues), 27.3 bits, see alignment 1.2e-09 PF07647: SAM_2" amino acids 607 to 670 (64 residues), 26.1 bits, see alignment 2.3e-09 PF00169: PH" amino acids 992 to 1084 (93 residues), 51.9 bits, see alignment 2.9e-17

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1354 amino acids)

>mRNA_7799 KOG1738 Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like (Rhodosporidium toruloides IFO0880)
MADPTAPSSPQLKAPGKEDVVWALHTFEAENDDELTFEAGEKIVVLERDDQYGDGWFQGR
NERGEVGLFPQSYTSSRPPSFFPSDDANDVDGAGASSAGPDTIVSPTPFLATTTASPILS
HDDDASPADGPNGRLAPLSSRRDSVSETSVHSRYDDDEEDDAASSIHHAPSSSQRMSDGA
AHRAALAARVSENAERAAQEERERAEARKREDEERYREYRKSGLIEGLQLSDESDDEEED
EAPLPLPSSVEASSDEAGLANGEKAVPAVNGGPAPVPSEAEEVLATPARISTDAERPDIR
PRADTQPSIYAESTYSNNSSIPPVPSPPVLPTSEPSPSIAAVSAPEPVDAAPLPNERAKE
PILAGTPAILAAESASPVAGDETPRSPAPVESAPAQPEPETSATTVITETLKSTTHTAAE
ALTAGAAGVVAAATTAAAIAGVSLSHDLKEEQKDVEEVKKEEVAVPKEAEPVLETDAVDP
AAPPKPETTAIPAVTDHSVTPVPASAADAVVESSAPPASSEARPSAVAAAPVVPRSTTPP
ATSAPTIQPSSPSTTAESRSSTPATPAPLSSSIITAATTATPAASVSGDATGTSEAGKKD
LPADPMNWNVDDVVEWGKQKGFDQLTLSKFAEHEISGDVLLEMDVAMLKEIDLVAFGRRV
HIYNAIKELRIRTQPPRALTASQSTAGSFIAPSMTGYEPDSPTSLAYSPSISALHHQQNP
HLRWQQQQLMQGGSLAGFGIEGDSAPTSLRAPSSLGQQSMTNLRSSQPASAEAAPPAQST
PQPPPLAAPIPPIAETTPAAPTPTSPVLGDDSRKPKTRPSITSSIRPRSSRRASDRTAGG
DSSATSVPNSPDPGAAASQSRKSSAGDKTGFFGTLPSLPGRTRKAPPRVPSALLVDSNGA
IPRPRPRTSLQDRAKRSTRLFGSFGTNSGSEKSPTAVESVRSRPSNSTLGGGRDAPTAMT
VKSVDPATKEMMREKAELVTDGNLMDKIGRPDHSGWMRKRGEKYNTWKMRFFVLKGVYLY
YLKTEAEQKAKGVIDLTGYRVLSDPDIRPGEYAFKIVHDTERPHYFAAAEQITVRNWMKE
IMKATILRDYSAPVVSSCDIEVLPLDIARTTHPRPPSPTRRAQIQQKRYAGRDPNKLSDK
EATILMDLAPGSPLMNGEDLYSSVSKRPSLAPDGTRKASTTSTSSVATAKEATTPLAAPV
GVPASTTSASNGANAATDANSKATLGRLQRATSDTTNAELLAWLNSNLPSSCPLATDLSS
SLRSGRLIVRLLENLSGESSGISDGQFDAFHQQVGEAFDTAYLDTIFSVFDFITPLASTD
DISMEDMITGNEPRLTILLERIRSKFPAPAAVVA