Protein Info for mRNA_7838 in Rhodosporidium toruloides IFO0880

Name: 16206
Annotation: K01011 TST, MPST, sseA thiosulfate/3-mercaptopyruvate sulfurtransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 315 PF00581: Rhodanese" amino acids 18 to 142 (125 residues), 40.5 bits, see alignment E=1.7e-14 amino acids 178 to 306 (129 residues), 24.6 bits, see alignment E=1.5e-09

Best Hits

Predicted SEED Role

"Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1)" (EC 2.8.1.1)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.8.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (315 amino acids)

>mRNA_7838 K01011 TST, MPST, sseA thiosulfate/3-mercaptopyruvate sulfurtransferase (Rhodosporidium toruloides IFO0880)
MLSRSVSSTASRPVSLITPAELHKLLSSKNEEELPCVLDASWHMPGSGRQPFQEYRKKRI
EGAAFWDVDQIASESDVGVPHNMPSASQFEDACSRLGIKRDSHVVVYDTVGVFSSPRTAF
TFKHFNHPQVSVLDGGLPRWIAEGYPIDENRPTNPNPHAYKVDGGEKSDVRQWKDMTKNI
KKGEKGDVVVDARAAGRFHGTDPEPREGLSSGHMPHSISLPFQSALSPESSTTPPYRTLL
KPEELEKVFVGALGKEKWEKVKQGEKSVTATCGSGMTAAVLWLALQRAGVTDNTAIYDES
WTGYASRPESKIVKS