Protein Info for mRNA_7855 in Rhodosporidium toruloides IFO0880

Name: 16223
Annotation: K15443 TRM82, WDR4 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 583 transmembrane" amino acids 331 to 349 (19 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (583 amino acids)

>mRNA_7855 K15443 TRM82, WDR4 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 (Rhodosporidium toruloides IFO0880)
MEHPVQVLASTTEHIVTASNTKLTVFDAATNAPIASATNHKALIRLLATFTDDVAKKAYL
VSTGEDKLLQVSSLPDLQLLSSRDLPKRANALEVTASGDIVVGDKFGDVYIFPLDAPTVP
ANVKPEDLPKPQPILGHVSMLNTLALIPADPAHGLARDWIATGDRDEHVRISRFPAGHVI
EKFAWGSKRLVSSLLYLPAPSSSSAAPSPPYLLSAGADPSIQVFELPSAELVSRFPIEEI
ISAYIVVNPEAPTPVPAGRRKNKQGAKKGKGKQVSTEGESAEQADAAATPEPEATAEEGG
DGSAAHGAELAKGLAVVKMLEVGTTREDGGIVVLVAGSTALLYIPFSLLLPTHPAAAAST
DAAPSLLRAAHPILDIVPTPIPASADSQCEFLVSLDHTRTPSLPPATTDPEQPHTPLMRI
SLGKDGQLRALPTLTTDAVLFDSAYAQQPENAKQPSVASLYPVLSLLHHPGDEEFAEGGG
DDDEAPRVSRKVGRGVKRTAPGSNGTPSEVGDGEEGAKRVGKRAIGRAETLRRYEEAKRK
LQAGGETAQSLTEGEKAAVKEMEEEAEAAAAAEGAEMEGAHVA